Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2643908 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2643908, End: 2644198, Length: 291

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2298000:229805622980562298373318Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative lipoprotein1e-1272
NC_014121:1848971:186880718688071869073267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative cytoplasmic protein1e-1168.6
NC_016514:2476359:247635924763592476625267Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein4e-1166.6
NC_011149:1429523:146530314653031465569267Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein1e-1065.5
NC_011294:1465500:148734714873471487502156Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-0960.1
NC_013508:1862896:188496918849691885211243Edwardsiella tarda EIB202, complete genomehypothetical protein3e-0753.9