Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1871202 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1871202, End: 1871678, Length: 477

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007760:3735749:375206137520613752612552Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein6e-24109
NC_009436:3367194:338559933855993386099501Enterobacter sp. 638, complete genomehypothetical protein6e-1993.2
NC_011365:592256:605714605714606181468Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein6e-1889.7