Pre_GI: BLASTP Hits

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Query: NC_012854:1:9828 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,

Start: 9828, End: 11744, Length: 1917

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:4025559:4030310403031040321871878Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein1e-1172
NC_019904:3127945:3131851313185131330051155Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein2e-1068.6
NC_015379:1600715:1612034161203416133201287Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein8e-0859.3
NC_015321:4495394:4495394449539444965451152Fluviicola taffensis DSM 16823 chromosome, complete genomehypothetical protein1e-0758.5
NC_015690:1186545:1207560120756012089511392Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein7e-0756.2
NC_016602:3122700:3134465313446531357241260Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein4e-0653.9