Pre_GI: BLASTP Hits

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Query: NC_012850:459315:472699 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Start: 472699, End: 474471, Length: 1773

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012850:459315:4621214621214638421722Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeCapsule polysaccharide biosynthesis protein8e-148524
NC_015666:1672740:1683509168350916851011593Halopiger xanaduensis SH-6 chromosome, complete genomeCapsule polysaccharide biosynthesis protein1e-28128
NC_017277:1610391:1626856162685616284241569Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-26120
NC_017052:1610500:1627055162705516286231569Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-26120
NC_017039:1610602:1627067162706716286351569Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-26120
NC_000911:1611500:1628039162803916296071569Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-26120
NC_011296:463359:4655474655474672081662Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein2e-21103
NC_015437:27325:4645446454480641611Selenomonas sputigena ATCC 35185 chromosome, complete genomehypothetical protein9e-0962.4