Pre_GI: BLASTP Hits

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Query: NC_012811:227541:227239 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 227239, End: 227544, Length: 306

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010677:1296000:130789913078991308126228Francisella tularensis subsp. mediasiatica FSC147, complete genometranscriptional regulator4e-0960.1
NC_018000:2964500:296473329647332964963231Sinorhizobium fredii USDA 257 chromosome, complete genomeHTH-type transcriptional regulator y4mF4e-0857
NC_011916:467106:495332495332495655324Caulobacter crescentus NA1000 chromosome, complete genometranscriptional regulator7e-0855.8
NC_011916:2967624:297880929788092979663855Caulobacter crescentus NA1000 chromosome, complete genomeMerR family transcriptional regulator6e-0752.8
NC_002696:2941644:295282929528292953683855Caulobacter crescentus CB15, complete genometranscriptional regulator, Cro/CI family6e-0752.8
NC_020304:752012:758399758399758641243Desulfocapsa sulfexigens DSM 10523, complete genomeputative transcriptional regulator6e-0752.8
NC_007333:2093167:2113064211306421143981335Thermobifida fusca YX, complete genomehelix-turn-helix motif1e-0652
NC_012918:356019:360951360951361229279Geobacter sp. M21 chromosome, complete genomehypothetical protein4e-0650.1