Pre_GI: BLASTP Hits

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Query: NC_012808:420334:443325 Methylobacterium extorquens AM1, complete genome

Start: 443325, End: 444569, Length: 1245

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010172:632180:6556796556796569231245Methylobacterium extorquens PA1, complete genomepolyhydroxyalkanoate depolymerase, intracellular0823
NC_011757:577611:6011176011176023611245Methylobacterium chloromethanicum CM4, complete genomepolyhydroxyalkanoate depolymerase, intracellular0819
NC_010725:594500:6175526175526187961245Methylobacterium populi BJ001, complete genomepolyhydroxyalkanoate depolymerase, intracellular0777
NC_010511:5169338:5179880517988051812201341Methylobacterium sp. 4-46 chromosome, complete genomepolyhydroxyalkanoate depolymerase1e-147523
NC_011386:136223:1348461348461364291584Oligotropha carboxidovorans OM5, complete genomepolyhydroxyalkanoate depolymerase, intracellular4e-139494
NC_015684:362236:3925353925353938631329Oligotropha carboxidovorans OM5 chromosome, complete genomepolyhydroxyalkanoate depolymerase PhaZ4e-139494
NC_010002:3980832:3983219398321939845921374Delftia acidovorans SPH-1, complete genomepolyhydroxyalkanoate depolymerase, intracellular4e-97355
NC_015563:3571682:3593621359362135949941374Delftia sp. Cs1-4 chromosome, complete genomepolyhydroxyalkanoate depolymerase, intracellular1e-96353
NC_008543:582129:5827015827015840561356Burkholderia cenocepacia HI2424 chromosome 2, complete sequencepolyhydroxyalkanoate depolymerase, intracellular3e-95348
NC_012988:4633930:4634937463493746361511215Methylobacterium extorquens DM4, complete genomeintracellular PHB depolymerase, polyhydroxyalkanoate depolymerase6e-94344
NC_010172:4185904:4188227418822741894411215Methylobacterium extorquens PA1, complete genomepolyhydroxyalkanoate depolymerase, intracellular1e-93343
NC_012808:4235567:4236574423657442377881215Methylobacterium extorquens AM1, complete genomeintracellular PHB depolymerase, polyhydroxyalkanoate depolymerase1e-93343
NC_011001:854713:8552828552828566371356Burkholderia cenocepacia J2315 chromosome 2, complete sequencepoly[D-(-)-3-hydroxybutyrate] depolymerase1e-93343
NC_008781:2883968:2899971289997129012001230Polaromonas naphthalenivorans CJ2, complete genomepolyhydroxyalkanoate depolymerase, intracellular2e-91336
NC_013757:3897413:3927748392774839289921245Geodermatophilus obscurus DSM 43160, complete genomepolyhydroxyalkanoate depolymerase, intracellular5e-87321
NC_015726:2862500:2862742286274228639561215Cupriavidus necator N-1 chromosome 1, complete sequenceintracellular poly(3-hydroxybutyrate) depolymerase PhaZ2e-82306
NC_009049:2131017:2159979215997921612501272Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencepolyhydroxyalkanoate depolymerase, intracellular3e-74279
NC_013446:2655955:267315426731542673807654Comamonas testosteroni CNB-2, complete genomepolyhydroxyalkanoate depolymerase1e-32140
NC_013446:2655955:267236826723682673000633Comamonas testosteroni CNB-2, complete genomepolyhydroxyalkanoate depolymerase2e-22107