Pre_GI: BLASTP Hits

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Query: NC_012808:4078459:4095561 Methylobacterium extorquens AM1, complete genome

Start: 4095561, End: 4096250, Length: 690

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:1707293:170729317072931708120828Clostridium difficile CD196 chromosome, complete genomehypothetical protein2e-29129
NC_009656:2422083:242560624256062426157552Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-28126
NC_002737:533291:539164539164539793630Streptococcus pyogenes M1 GAS, complete genomehypothetical protein7e-28124
NC_021182:4367736:437222443722244372838615Clostridium pasteurianum BC1, complete genomehypothetical protein2e-26119
NC_015428:1544728:158381515838151584510696Lactobacillus buchneri NRRL B-30929 chromosome, complete genomePathogenesis-related transcriptional factor and ERF protein1e-25116
NC_011770:2690501:270879627087962709428633Pseudomonas aeruginosa LESB58, complete genomehypothetical protein5e-25114
NC_010002:3509506:354012335401233540641519Delftia acidovorans SPH-1, complete genomehypothetical protein4e-24111
NC_006086:987991:991441991441992133693Streptococcus pyogenes MGAS10394, complete genomehypothetical protein2e-21102
NC_003485:1041280:104597510459751046667693Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-21101
NC_009256:1253384:125774712577471258313567Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein5e-2097.8
NC_008576:3331825:335446533544653355130666Magnetococcus sp. MC-1, complete genomehypothetical protein1e-1892.8
NC_008758:12000:233432334323999657Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein2e-1789.4
NC_009720:4087831:408917640891764089430255Xanthobacter autotrophicus Py2, complete genome2e-1582.4
NC_005070:1144777:115651411565141157080567Synechococcus sp. WH 8102, complete genomeconserved hypothetical protein, phage associated1e-1273.2
NC_012004:1053682:105573110557311056168438Streptococcus uberis 0140J, complete genomehypothetical protein6e-0961.2
NC_007948:1972290:1982517198251719841901674Polaromonas sp. JS666, complete genomeExcinuclease ABC, C subunit-like9e-0753.9
NC_017068:1327025:1342914134291413446141701Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-0652.4
NC_017190:2130651:215198821519882152725738Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein6e-0651.2