Pre_GI: BLASTP Hits

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Query: NC_012808:4078459:4085673 Methylobacterium extorquens AM1, complete genome

Start: 4085673, End: 4086149, Length: 477

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:3608749:362717336271733627673501Bordetella pertussis CS chromosome, complete genomehypothetical protein5e-24109
NC_002929:3568106:358698835869883587488501Bordetella pertussis Tohama I, complete genomehypothetical protein5e-24109
NC_002927:3716894:373800537380053738505501Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-23107
NC_002927:2338549:236126123612612361761501Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-23107
NC_014313:165490:171132171132171617486Hyphomicrobium denitrificans ATCC 51888 chromosome, completePathogenesis-related transcriptional factor and ERF protein7e-22102
NC_015563:3074691:308337130833713083862492Delftia sp. Cs1-4 chromosome, complete genomePathogenesis-related transcriptional factor and ERF protein4e-2097.1
NC_013361:3112023:312237631223763122942567Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-1892.4
NC_013364:2645438:264601526460152646581567Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-1892.4
NC_013364:2898964:291234129123412912907567Escherichia coli O111:H- str. 11128, complete genomeputative endonuclease1e-1892.4
NC_002695:3468873:348963034896303490196567Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1892.4
NC_013008:3525428:354861535486153549181567Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1892.4
NC_011035:541560:542831542831543349519Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein1e-1891.7
NC_002655:3538656:355695335569533557558606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y2e-1891.7
NC_002946:1020175:106320710632071063725519Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein8e-1889.4
NC_010002:3509506:352002335200233520547525Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein1e-1789
NC_007493:1672163:168911316891131689598486Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative endonuclease4e-1787.4
NC_011770:2690501:272554427255442726101558Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-1582.4
NC_011601:717072:735907735907736335429Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease2e-1478.6
NC_017328:335160:342492342492343031540Shigella flexneri 2002017 chromosome, complete genomeHNH endonuclease2e-1478.6
NC_010002:3509506:352074335207433521243501Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein3e-1477.4
NC_011601:4856717:485836248583624858871510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease, HNH family5e-1476.6
NC_013282:1200993:121347112134711214031561Cronobacter turicensis, complete genomehypothetical protein7e-1476.3
NC_007964:328825:334182334182334670489Nitrobacter hamburgensis X14, complete genomeHNH endonuclease1e-1375.5
NC_009255:1369200:137188513718851372367483Burkholderia vietnamiensis G4 chromosome 2, complete sequencepathogenesis-related transcriptional factor and ERF protein3e-1373.9
NC_009049:2131017:214029221402922140522231Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencePathogenesis-related transcriptional factor and ERF protein9e-1372.8
NC_011770:860944:871763871763872272510Pseudomonas aeruginosa LESB58, complete genomeEndY1e-1272.4
NC_009255:1369200:137403913740391374575537Burkholderia vietnamiensis G4 chromosome 2, complete sequenceHNH endonuclease2e-1168.2
NC_021182:2536000:254900225490022549733732Clostridium pasteurianum BC1, complete genomeAP2 domain-containing protein2e-0961.6
NC_007493:1672163:169739016973901697896507Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePossible Endonuclease2e-0858.2
NC_011001:2085986:210140821014082101989582Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phage-related endonuclease1e-0755.8
NC_012490:2660089:266948226694822670093612Rhodococcus erythropolis PR4, complete genomehypothetical protein5e-0650.4
NC_017337:1990298:200714020071402007919780Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein6e-0650.1