Pre_GI: BLASTP Hits

Some Help

Query: NC_012808:4078459:4082135 Methylobacterium extorquens AM1, complete genome

Start: 4082135, End: 4082698, Length: 564

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:1803266:182377918237791824309531Polymorphum gilvum SL003B-26A1 chromosome, complete genomeNusG antitermination factor3e-0651.2
NC_007626:3393940:339647833964783397011534Magnetospirillum magneticum AMB-1, complete genomeTranscription antiterminator5e-0650.8
NC_015380:1066911:109133310913331091860528Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genometranscription antitermination protein NusG5e-0650.8
NC_011894:3671162:367312536731253673661537Methylobacterium nodulans ORS 2060, complete genomeNusG antitermination factor7e-0650.4
NC_007205:1059684:108469210846921085222531Candidatus Pelagibacter ubique HTCC1062, complete genometranscription antitermination protein NusG8e-0650.1