Pre_GI: BLASTP Hits

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Query: NC_012808:1979000:1994483 Methylobacterium extorquens AM1, complete genome

Start: 1994483, End: 1995805, Length: 1323

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4262631:4283693428369342850181326Methylobacterium extorquens DM4, complete genomePhage integrase1e-31137
NC_007964:3638415:3655484365548436566981215Nitrobacter hamburgensis X14, complete genomephage integrase5e-26119
NC_017249:8510121:855152085515208552374855Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-1995.1
NC_004463:1717890:174180817418081742662855Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase8e-1995.1
NC_007626:3996000:400655640065564007533978Magnetospirillum magneticum AMB-1, complete genomeIntegrase9e-1995.1
NC_017249:8510121:8538185853818585393841200Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1791.7
NC_012988:4262631:428275942827594283718960Methylobacterium extorquens DM4, complete genomePhage integrase2e-1274.3