Pre_GI: BLASTP Hits

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Query: NC_012808:1979000:1988463 Methylobacterium extorquens AM1, complete genome

Start: 1988463, End: 1988900, Length: 438

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:1280610:1291281129128112934132133Methylobacterium extorquens DM4, complete genomehypothetical protein2e-62236
NC_016626:1592781:1607837160783716099902154Burkholderia sp. YI23 plasmid byi_1p, complete sequenceamylo-alpha-16-glucosidase9e-52201
NC_015675:4442000:4447846444784644500022157Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAmylo-alpha-16-glucosidase8e-51198
NC_013524:171524:1888561888561910662211Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeAmylo-alpha-16-glucosidase3e-36150
NC_008254:3980327:3980327398032739825312205Mesorhizobium sp. BNC1, complete genomeAmylo-alpha-1,6-glucosidase2e-29127
NC_015757:2343193:2359237235923723613662130Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein1e-27121
NC_016884:3219030:3235074323507432372542181Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeamylo-alpha-16-glucosidase1e-27121
NC_017059:3355006:3355006335500633571922187Rhodospirillum photometricum DSM 122, complete genomeamylo-alpha-16-glucosidase1e-25115
NC_016641:2618587:2643796264379626458952100Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-25114
NC_007355:499764:5071435071435093262184Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein5e-25112
NC_008343:2389710:2405197240519724074072211Granulibacter bethesdensis CGDNIH1, complete genomehypothetical protein6e-24109
NC_009464:225400:2473232473232495392217Uncultured methanogenic archaeon RC-I, complete genomepredicted amylo-alpha-1,6-glucosidase7e-24108
NC_007947:485828:5036275036275057622136Methylobacillus flagellatus KT, complete genomeAmylo-alpha-1,6-glucosidase2e-22104
NC_013521:713196:7177777177777197141938Sanguibacter keddieii DSM 10542, complete genomeglycogen debranching enzyme1e-2098.2
NC_015675:4442000:4444827444482744469952169Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAmylo-alpha-16-glucosidase4e-2096.7
NC_013501:2039339:2065836206583620684422607Rhodothermus marinus DSM 4252, complete genomeAmylo-alpha-16-glucosidase1e-0651.6