Pre_GI: BLASTP Hits

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Query: NC_012808:1220378:1223218 Methylobacterium extorquens AM1, complete genome

Start: 1223218, End: 1224336, Length: 1119

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:1627698:1630340163034016316291290Methylobacterium chloromethanicum CM4, complete genomeCellulase0691
NC_010172:1522707:1525352152535215266111260Methylobacterium extorquens PA1, complete genomeCellulase0691
NC_010725:1419272:1421899142189914231641266Methylobacterium populi BJ001, complete genomeCellulase0655
NC_011894:3820000:3843183384318338445891407Methylobacterium nodulans ORS 2060, complete genomeglycoside hydrolase family 81e-158559
NC_011138:831585:8304888304888315881101Alteromonas macleodii 'Deep ecotype', complete genomeendoglucanase Y3e-44179
NC_016631:2583762:2597009259700925981331125Granulicella mallensis MP5ACTX8 chromosome, complete genomecellulase1e-1894
NC_014394:522000:5285585285585297121155Gallionella capsiferriformans ES-2 chromosome, complete genomeCellulase9e-1581.3
NC_010551:1412139:1430791143079114320111221Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceCellulase6e-1478.6
NC_013410:1491000:1506006150600615074541449Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycoside hydrolase family protein1e-1067.8
NC_016627:1213357:1234153123415312356041452Clostridium clariflavum DSM 19732 chromosome, complete genomeendoglucanase Y3e-1066.6
NC_014828:943911:970624970624971613990Ethanoligenens harbinense YUAN-3 chromosome, complete genomeglycoside hydrolase family 82e-0963.9
NC_020450:614637:6325286325286336431116Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeputative beta-glucanase precursor8e-0962