Pre_GI: BLASTP Hits

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Query: NC_012668:368305:402065 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 402065, End: 403648, Length: 1584

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:4631866:4641261464126146428261566Shewanella sp. MR-4, complete genomehypothetical protein3e-140498
NC_008577:4907497:4916895491689549184601566Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein8e-139494
NC_017279:1355441:1362039136203913635621524Campylobacter jejuni subsp. jejuni IA3902 chromosome, completecapsular polysaccharide biosynthesis protein4e-95348
NC_012039:257962:2738452738452753831539Campylobacter lari RM2100, complete genomecapsular polysaccharide biosynthesis protein2e-93343
NC_013209:1925341:1944581194458119461641584Acetobacter pasteurianus IFO 3283-01, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017100:1929672:1945567194556719471501584Acetobacter pasteurianus IFO 3283-03, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017108:1925323:1944563194456319461461584Acetobacter pasteurianus IFO 3283-12, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017111:1925311:1944551194455119461341584Acetobacter pasteurianus IFO 3283-32, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017121:1925323:1944563194456319461461584Acetobacter pasteurianus IFO 3283-07, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017125:1929666:1945562194556219471451584Acetobacter pasteurianus IFO 3283-22, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017146:1929678:1945574194557419471571584Acetobacter pasteurianus IFO 3283-26, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_017150:1833087:1852327185232718539101584Acetobacter pasteurianus IFO 3283-01-42C, complete genomecapsular polysaccharide biosynthesis protein1e-91337
NC_018145:50237:5761757617592421626Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completecapsular polysaccharide biosynthesis protein4e-91335
NC_006526:1303635:1314028131402813156531626Zymomonas mobilis subsp. mobilis ZM4, complete genomecapsular polysaccharide biosynthesis protein5e-91335
NC_015677:896673:9166749166749182121539Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-89329
NC_017033:3013654:3031487303148730330941608Frateuria aurantia DSM 6220 chromosome, complete genomeNucleoside-diphosphate-sugar pyrophosphorylase family protein1e-81303
NC_011751:3530954:3539416353941635409931578Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-79296
NC_011144:1264871:1286765128676512883631599Phenylobacterium zucineum HLK1, complete genomecapsular polysaccharide biosynthesis protein2e-78293
NC_014973:2945942:2954124295412429555511428Geobacter sp. M18 chromosome, complete genomehypothetical protein3e-24113
NC_012918:1921891:1932266193226619336901425Geobacter sp. M21 chromosome, complete genomehypothetical protein3e-24113
NC_007347:767455:7905027905027919741473Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein2e-20100
NC_020291:4944835:4978070497807049795721503Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits5e-0756.6
NC_007516:347824:3554773554773573961920Synechococcus sp. CC9605, complete genomehypothetical protein3e-0653.5