Pre_GI: BLASTP Hits

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Query: NC_012668:3037345:3060541 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 3060541, End: 3061515, Length: 975

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014394:942015:962920962920963894975Gallionella capsiferriformans ES-2 chromosome, complete genomeStbA family protein6e-78291
NC_015850:2048251:2061911206191120629241014Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein6e-57221
NC_007298:2689731:2726099272609927271631065Dechloromonas aromatica RCB, complete genomehypothetical protein2e-26120
NC_015422:2858228:2893174289317428942051032Alicycliphilus denitrificans K601 chromosome, complete genomePRTRC system protein D3e-26119
NC_015422:3413386:3424187342418734252181032Alicycliphilus denitrificans K601 chromosome, complete genomePRTRC system protein D2e-24113
NC_010682:1624985:164433216443321645330999Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein9e-22104
NC_010087:265625:2891992891992902031005Burkholderia multivorans ATCC 17616 chromosome 3, completeconserved hypothetical protein8e-2098.2
NC_010801:629347:634742634742635659918Burkholderia multivorans ATCC 17616 chromosome 3, completeactin-like ATPase2e-1996.3
NC_008786:4040864:4055141405514140561901050Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein3e-1892.8
NC_015589:3813415:3818446381844638195161071Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeStbA family protein8e-1581.3
NC_007950:185500:1865511865511876181068Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein4e-1272.4
NC_014964:35862:4204742047430841038Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeStbA family protein6e-1065.1
NC_010321:35855:4204042040430771038Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeStbA family protein6e-1065.1
NC_014539:888562:8955368955368965521017Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein1e-0964.3
NC_014836:1551965:158385915838591584815957Desulfurispirillum indicum S5 chromosome, complete genomeStbA family protein8e-0961.6
NC_011774:115228:88588858100391182Bacillus cereus G9842 plasmid pG9842_140, complete sequencehypothetical protein9e-0858.2
NC_003869:1971766:1989067198906719900861020Thermoanaerobacter tengcongensis MB4, complete genomehypothetical protein2e-0757
NC_006823:10893:2130921309223101002Azoarcus sp. EbN1 plasmid 1, complete sequencehypothetical protein5e-0755.5
NC_015573:893862:9292659292659303381074Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein8e-0755.1
NC_010718:2492895:2505458250545825065881131Natranaerobius thermophilus JW/NM-WN-LF, complete genomehypothetical protein9e-0754.7
NC_007484:667879:6710776710776721681092Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein4e-0652.4
NC_014721:2201790:221820022182002219150951Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein9e-0651.2