Pre_GI: BLASTP Hits

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Query: NC_012668:3037345:3044116 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 3044116, End: 3044961, Length: 846

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013365:92973:107868107868108713846Escherichia coli O111:H- str. 11128 plasmid pO111_1, completestreptomycin phosphotransferase2e-163574
NC_017387:247462:292267292267293103837Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomestreptomycin 3''-kinase6e-162570
NC_017171:280762:290244290244291080837Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomestreptomycin 3''-kinase6e-162570
NC_017162:270460:280935280935281771837Acinetobacter baumannii 1656-2 chromosome, complete genomeStreptomycin resistance protein B6e-162570
NC_009656:5475540:550389255038925504728837Pseudomonas aeruginosa PA7 chromosome, complete genomestreptomycin phosphotransferase6e-162570
NC_003384:157158:167667167667168503837Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidstreptomycin phosphotransferase6e-162570
NC_016445:89500:100317100317101147831Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completestreptomycin phosphotransferase StrB3e-160564
NC_010545:1781393:179502217950221795852831Corynebacterium urealyticum DSM 7109, complete genomeaminoglycoside-6-phosphotransferase3e-160564
NC_010410:3606826:367882036788203679656837Acinetobacter baumannii AYE, complete genomeStreptomycin 3''-kinase (Streptomycin 3''-phosphotransferase) (SPH)5e-158556
NC_008391:1768456:177267117726711773537867Burkholderia cepacia AMMD chromosome 2, complete sequenceaminoglycoside/hydroxyurea antibiotic resistance kinase1e-22107
NC_021066:1712905:175455217545521755379828Raoultella ornithinolytica B6, complete genomestreptomycin 3''-kinase3e-22105
NC_010552:2541100:254535725453572546217861Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceaminoglycoside/hydroxyurea antibiotic resistance kinase1e-21103
NC_013526:316075:331026331026331928903Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeaminoglycoside/hydroxyurea antibiotic resistance kinase3e-1582.4
NC_010793:541040:564558564558565460903Orientia tsutsugamushi str. Ikeda, complete genomeputative streptomycin-6-phosphotransferase7e-1374.7
NC_010407:151599:174037174037174942906Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative aminoglycoside phosphotransferase1e-0653.9
NC_014210:2638773:265102026510202651943924Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6-kinase2e-0653.5
NC_009142:6729512:673185567318556732742888Saccharopolyspora erythraea NRRL 2338, complete genomehydroxyurea phosphotransferase9e-0651.2