Pre_GI: BLASTP Hits

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Query: NC_012667:839318:862400 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 862400, End: 863899, Length: 1500

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:683887:7066087066087081071500Vibrio cholerae O395 chromosome chromosome II, complete sequencesensor histidine kinase01032
NC_016628:193000:1962961962961977711476Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesensor histidine kinase0793
NC_013457:140474:1435711435711450251455Vibrio sp. Ex25 chromosome 2, complete genomesignal transduction histidine kinase0721
NC_014966:919442:9328219328219343051485Vibrio vulnificus MO6-24/O chromosome II, complete sequencesignal transduction histidine kinase0716
NC_005140:883857:9024869024869039131428Vibrio vulnificus YJ016 chromosome II, complete sequencesignal transduction histidine kinase0716
NC_015177:1859879:1861016186101618627761761Pedobacter saltans DSM 12145 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0963.9
NC_013757:1544348:1573944157394415758481905Geodermatophilus obscurus DSM 43160, complete genomemulti-sensor signal transduction histidine kinase1e-0862
NC_015164:1877981:1886675188667518880631389Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0861.6
NC_005071:866468:8811218811218824431323Prochlorococcus marinus str. MIT 9313, complete genometwo-component sensor histidine kinase2e-0861.2
NC_012587:3177583:3181521318152131827681248Rhizobium sp. NGR234, complete genomesensor protein2e-0860.8
NC_012587:128845:1301261301261328102685Rhizobium sp. NGR234, complete genomeosmosensitive K+ channel signal transduction histidine kinase3e-0860.5
NC_007356:202131:2065942065942078741281Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase4e-0860.1
NC_004193:375416:6112396112396126211383Oceanobacillus iheyensis HTE831, complete genometwo-component sensor histidine kinase7e-0859.3
NC_013501:1691532:1691532169153216928721341Rhodothermus marinus DSM 4252, complete genomehistidine kinase9e-0858.9
NC_009484:775828:7964327964327990352604Acidiphilium cryptum JF-5 chromosome, complete genomeosmosensitive K+ channel signal transduction histidine kinase1e-0758.5
NC_013552:1240073:1253297125329712545771281Dehalococcoides sp. VS, complete genomesensor histidine kinase1e-0758.5
NC_009092:4337617:4338364433836443396741311Shewanella loihica PV-4, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0758.2
NC_016610:1310275:1332960133296013352782319Tannerella forsythia ATCC 43037 chromosome, complete genomeATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein1e-0758.2
NC_002927:383760:3902133902133915861374Bordetella bronchiseptica RB50, complete genomesensor kinase protein3e-0757.4
NC_008820:1197898:1199688119968812010221335Prochlorococcus marinus str. MIT 9303, complete genometwo-component sensor histidine kinase3e-0757.4
NC_001263:2236777:223752122375212238195675Deinococcus radiodurans R1 chromosome 1, complete sequencesensory transduction histidine kinase3e-0757.4
NC_000911:2511514:2518321251832125218573537Synechocystis sp. PCC 6803, complete genomehybrid sensory kinase3e-0757
NC_015566:345084:3791603791603808721713Serratia sp. AS12 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase3e-0757
NC_015567:346500:3793463793463810581713Serratia sp. AS9 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase3e-0757
NC_009832:4482500:4494141449414144957841644Serratia proteamaculans 568, complete genomehistidine kinase4e-0756.6
NC_011891:2088134:2093586209358620958772292Anaeromyxobacter dehalogenans 2CP-1, complete genomeGAF sensor signal transduction histidine kinase4e-0756.6
NC_015164:2935363:2956174295617429584922319Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase5e-0756.6
NC_012778:1573847:1577076157707615783411266Eubacterium eligens ATCC 27750, complete genomehypothetical protein8e-0755.8
NC_013169:474856:4883334883334895021170Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase1e-0655.5
NC_012811:139498:1549681549681563021335Methylobacterium extorquens AM1 megaplasmid, complete sequencePeriplasmic sensor signal transduction histidine kinase1e-0655.1
NC_011757:1067543:1082976108297610843101335Methylobacterium chloromethanicum CM4, complete genomehistidine kinase1e-0655.1
NC_002936:285527:2884842884842897641281Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase1e-0655.1
NC_013595:235931:2482832482832496651383Streptosporangium roseum DSM 43021, complete genomeSignal transduction histidine kinase-like protein2e-0654.3
NC_015846:2285017:2287061228706122899012841Capnocytophaga canimorsus Cc5 chromosome, complete genomeAutoinducer 2 sensor kinase/phosphatase luxQ2e-0654.3
NC_013730:1074393:1095802109580210972471446Spirosoma linguale DSM 74, complete genomehistidine kinase2e-0654.3
NC_013173:1259898:1262227126222712656583432Desulfomicrobium baculatum DSM 4028, complete genomePAS/PAC sensor hybrid histidine kinase2e-0654.3
NC_013887:213699:2302912302912321861896Methanocaldococcus sp. FS406-22 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0653.9
NC_014933:3856561:3870419387041938744744056Bacteroides helcogenes P 36-108 chromosome, complete genomeintegral membrane sensor hybrid histidine kinase3e-0653.9
NC_005957:4850659:4850659485065948521671509Bacillus thuringiensis serovar konkukian str. 97-27, completesensory transduction protein3e-0653.9
NC_012559:854507:8569978569978591652169Laribacter hongkongensis HLHK9, complete genomeSensor protein5e-0652.8
NC_013892:4129500:4131105413110541324751371Xenorhabdus bovienii SS-2004 chromosome, complete genomesensory histidine kinase in two-component regulatory system with CpxR, regulates genes involved in folding/degrading periplasmic proteins, senses chan6e-0652.8
NC_007510:2284000:2303497230349723048581362Burkholderia sp. 383 chromosome 1, complete sequenceperiplasmic sensor signal transduction histidine kinase6e-0652.8
NC_017986:3283433:3285429328542932867571329Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase8e-0652.4