Pre_GI: BLASTP Hits

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Query: NC_012660:4149487:4149487 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4149487, End: 4151634, Length: 2148

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016027:1851737:1870931187093118731052175Gluconacetobacter xylinus NBRC 3288, complete genomeTonB-dependent outer membrane siderophore receptor3e-128459
NC_010794:2071858:2083644208364420858182175Methylacidiphilum infernorum V4, complete genomeOuter membrane receptor protein, mostly Fe transport4e-72273
NC_015563:5289875:5303340530334053053822043Delftia sp. Cs1-4 chromosome, complete genomeTonB-dependent receptor2e-57224
NC_016112:1735044:1739722173972217421332412Methylomicrobium alcaliphilum chromosome, complete genomeTonB-dependent receptor protein8e-55215
NC_007974:1007834:1028158102815810303592202Ralstonia metallidurans CH34 chromosome 2, complete sequenceTonB-dependent receptor9e-54212
NC_010510:310938:3202153202153223652151Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeTonB-dependent receptor5e-49196
NC_011740:1494796:1494796149479614968982103Escherichia fergusonii ATCC 35469, complete genomeputative iron outer membrane receptor7e-1686.3
NC_011745:1581907:1583588158358815856902103Escherichia coli ED1a chromosome, complete genomeputative iron outer membrane receptor9e-1685.9
NC_010725:3273261:3274694327469432770182325Methylobacterium populi BJ001, complete genomeTonB-dependent receptor1e-1585.5
NC_007946:1586656:1590405159040515925072103Escherichia coli UTI89, complete genomeprobable tonB-dependent receptor YncD precursor3e-1584.3
NC_008563:1577879:1579324157932415814262103Escherichia coli APEC O1, complete genomepredicted iron outer membrane transporter3e-1584.3
NC_011751:1714131:1714131171413117162332103Escherichia coli UMN026 chromosome, complete genomeputative iron outer membrane receptor9e-1582.8
NC_011742:1528668:1532417153241715345192103Escherichia coli S88 chromosome, complete genomeiron outer membrane receptor8e-1582.8
NC_012759:1409086:1411046141104614131482103Escherichia coli BW2952 chromosome, complete genomeputative iron outer membrane transporter1e-1482
NC_000913:1517051:1518987151898715210892103Escherichia coli K12, complete genomepredicted iron outer membrane transporter1e-1482
NC_010473:1607646:1609582160958216116842103Escherichia coli str. K-12 substr. DH10B, complete genomepredicted iron outer membrane transporter1e-1482
AC_000091:1521976:1522677152267715247792103Escherichia coli W3110 DNA, complete genomepredicted iron outer membrane transporter1e-1482
NC_007947:2447635:2454117245411724562372121Methylobacillus flagellatus KT, complete genomeTonB-dependent receptor2e-1171.6
NC_010170:4800000:4904021490402149061502130Bordetella petrii, complete genomeTonB-dependent outer membrane receptor2e-1068.2
NC_009511:2726296:2743869274386927460672199Sphingomonas wittichii RW1 chromosome, complete genomeTonB-dependent receptor2e-0965.1
NC_011071:10842:2677226772288652094Stenotrophomonas maltophilia R551-3, complete genomeTonB-dependent receptor9e-0962.8
NC_007298:1129889:1144121114412111463012181Dechloromonas aromatica RCB, complete genomeTonB-dependent receptor:TonB box, N-terminal4e-0860.5