Pre_GI: BLASTP Hits

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Query: NC_012660:3179980:3201457 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3201457, End: 3202272, Length: 816

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:7482229:751327575132757514090816Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephytanoyl-CoA dioxygenase2e-52206
NC_018691:1322389:132346813234681324433966Alcanivorax dieselolei B5 chromosome, complete genomePhytanoyl-CoA dioxygenase (PhyH) family1e-30133
NC_018643:320197:335659335659336522864Alpha proteobacterium HIMB5 chromosome, complete genomePhytanoyl-CoA dioxygenase (PhyH)8e-22104
NC_014355:880856:901810901810902637828Candidatus Nitrospira defluvii, complete genomeputative dioxygenase4e-1788.6
NC_016935:2256000:228549522854952286238744Paenibacillus mucilaginosus 3016 chromosome, complete genomephytanoyl-CoA dioxygenase8e-0961.2
NC_015690:1726000:175545117554511756194744Paenibacillus mucilaginosus KNP414 chromosome, complete genomephytanoyl-CoA dioxygenase8e-0961.2
NC_007348:2519447:254148425414842542329846Ralstonia eutropha JMP134 chromosome 2, complete sequencePhytanoyl-CoA dioxygenase4e-0858.9
NC_014623:4999032:501682150168215017753933Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephytanoyl-CoA dioxygenase family protein1e-0757.4
NC_007794:1504449:152540415254041526213810Novosphingobium aromaticivorans DSM 12444, complete genomePhytanoyl-CoA dioxygenase1e-0757
NC_012914:569471:602538602538603371834Paenibacillus sp. JDR-2, complete genomePhytanoyl-CoA dioxygenase3e-0755.8
NC_020829:4390417:440879544087954409628834Pseudomonas denitrificans ATCC 13867, complete genomephytanoyl-CoA dioxygenase4e-0755.5
NC_008278:2772726:278969527896952790621927Frankia alni ACN14a, complete genomehypothetical protein8e-0754.3
NC_015690:1726000:174568917456891746600912Paenibacillus mucilaginosus KNP414 chromosome, complete genomephytanoyl-CoA dioxygenase3e-0652.4
NC_016935:2256000:227573322757332276644912Paenibacillus mucilaginosus 3016 chromosome, complete genomephytanoyl-CoA dioxygenase3e-0652.4
NC_007348:2519447:254277825427782543608831Ralstonia eutropha JMP134 chromosome 2, complete sequencePhytanoyl-CoA dioxygenase9e-0650.8