Pre_GI: BLASTP Hits

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Query: NC_012660:3116500:3125592 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3125592, End: 3126737, Length: 1146

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009074:3791232:3803668380366838048161149Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein2e-122439
NC_008570:2216736:2229994222999422311451152Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein3e-121435
NC_017033:678321:6917696917696929201152Frateuria aurantia DSM 6220 chromosome, complete genomeputative Zn peptidase2e-119429
NC_009445:6621996:6646416664641666475881173Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein1e-1480.9
NC_014098:2225174:2256635225663522578011167Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF9552e-1480.5
NC_010688:673454:6842416842416854491209Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-1170.5
NC_012587:128845:1357061357061368751170Rhizobium sp. NGR234, complete genomeconserved hypothetical protein contains helix-turn-helix type 3 domain2e-1170.5
NC_014314:1148000:1148588114858811498081221Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein2e-1170.1
NC_016884:2701217:2721585272158527227301146Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein1e-1067.4
NC_015578:1430112:1444014144401414451651152Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-1066.6
NC_017219:580093:5969725969725981771206Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein8e-1065.1
NC_011593:580318:5971795971795983841206Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,helix-turn-helix domain-containing protein8e-1065.1
NC_013730:7458076:7474834747483474760121179Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF9552e-0963.5
NC_006350:3710641:3719241371924137203111071Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative transcriptional regulator3e-0963.2
NC_010508:451184:4625024625024635721071Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehelix-turn-helix domain protein4e-0962.8
NC_003902:3514000:3526404352640435276301227Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein4e-0962.8
NC_013502:102430:6778677878211044Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequencehelix-turn-helix domain protein4e-0962.8
NC_009454:713892:7279337279337290001068Pelotomaculum thermopropionicum SI, complete genomehypothetical protein2e-0860.1
NC_010943:1938136:1946295194629519474311137Stenotrophomonas maltophilia K279a, complete genomeputative phage-related protein4e-0859.7
NC_010175:2488000:2492213249221324933551143Chloroflexus aurantiacus J-10-fl, complete genomeprotein of unknown function DUF9555e-0859.3
NC_014220:1858747:1863628186362818647431116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF9555e-0859.3
NC_008025:1998500:2007222200722220083521131Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF9557e-0858.5
NC_008786:3915000:3926529392652939276861158Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF9551e-0757.8
NC_010322:1817598:1836753183675318378531101Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-0756.6
NC_005966:3334864:3345832334583233469441113Acinetobacter sp. ADP1, complete genomeconserved hypothetical protein; putative peptidase4e-0756.2
NC_011296:801612:8097478097478109071161Thermodesulfovibrio yellowstonii DSM 11347, complete genomeDNA-binding protein4e-0755.8
NC_013790:2131000:2135417213541721364331017Methanobrevibacter ruminantium M1 chromosome, complete genomehypothetical protein7e-0755.5
NC_014034:3111981:3129118312911831303741257Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein7e-0755.5
NC_011740:2769961:2787740278774027888791140Escherichia fergusonii ATCC 35469, complete genomeputative peptidase m, neutral zinc metallopeptidases, zinc-binding site; protein9e-0755.1
NC_014364:1116439:1141492114149211426221131Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF9551e-0654.3
NC_002927:2636694:2646550264655026477611212Bordetella bronchiseptica RB50, complete genomeputative phage-related DNA-binding protein2e-0653.9
NC_007514:335085:3443693443693455471179Chlorobium chlorochromatii CaD3, complete genomehypothetical protein2e-0653.5
NC_014837:33014:4755647556486411086Pantoea sp. At-9b chromosome, complete genomehypothetical protein6e-0652.4
NC_008726:549102:5498745498745511181245Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF9559e-0651.6
NC_006087:28490:3729637296384501155Leifsonia xyli subsp. xyli str. CTCB07, complete genomeDNA-binding helix-turn-helix protein1e-0551.6