Pre_GI: BLASTP Hits

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Query: NC_012660:1579204:1602822 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1602822, End: 1603763, Length: 942

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:1322000:132686113268611327808948Azotobacter vinelandii DJ, complete genomeygfZ-like protein2e-94345
NC_021150:1322000:132687313268731327820948Azotobacter vinelandii CA6, complete genomeygfZ-like protein2e-94345
NC_010995:2547164:255158925515892552557969Cellvibrio japonicus Ueda107, complete genomehypothetical protein8e-38157
NC_012962:1364638:138290313829031383898996Photorhabdus asymbiotica, complete genomehypothetical protein2e-29130
NC_014121:4299500:433379243337924334772981Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative global regulator5e-28125
NC_008390:2018201:2019298201929820203321035Burkholderia cepacia AMMD chromosome 1, complete sequenceglycine cleavage T protein (aminomethyl transferase)1e-27124
NC_012779:3176820:322995632299563230951996Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-28124
NC_010551:2007926:2009643200964320106771035Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceglycine cleavage T protein (aminomethyl transferase)7e-28124
NC_020064:3825916:384628438462843847276993Serratia marcescens FGI94, complete genomefolate-binding protein YgfZ6e-28124
NC_013956:3525711:3546236354623635474471212Pantoea ananatis LMG 20103 chromosome, complete genomeYgfZ2e-27122
NC_015563:3786192:381946038194603820407948Delftia sp. Cs1-4 chromosome, complete genomefolate-binding protein YgfZ4e-24112
NC_017075:2733898:275345527534552754360906Rubrivivax gelatinosus IL144, complete genometRNA-modifying protein YgfZ3e-23109
NC_016002:1326500:133990213399021340480579Pseudogulbenkiania sp. NH8B, complete genomefolate-binding protein YgfZ3e-1686.3
NC_014722:1497244:150936815093681510342975Burkholderia rhizoxinica HKI 454, complete genomeaminomethyltransferase family protein1e-0964.3