Pre_GI: BLASTP Hits

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Query: NC_012125:894955:936052 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 936052, End: 936393, Length: 342

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:992811:100487410048741005212339Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-48191
NC_009802:1659257:167367116736711674009339Campylobacter concisus 13826, complete genomeL-alanyl-D-glutamate peptidase4e-1063.5
NC_003296:941920:966911966911967759849Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN4e-0650.1
NC_014931:6031645:603745560374556038300846Variovorax paradoxus EPS chromosome, complete genomepeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin4e-0650.1