Pre_GI: BLASTP Hits

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Query: NC_012125:894955:932966 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 932966, End: 933472, Length: 507

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:894136:932696932696933193498Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-31134
NC_013592:804288:833396833396833893498Dickeya dadantii Ech586, complete genomeProtein of unknown function DUF25883e-31134
NC_013892:992811:100180310018031002303501Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-29129