Pre_GI: BLASTP Hits

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Query: NC_012125:3941974:3941753 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 3941753, End: 3941989, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:3955479:395547939554793955715237Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-38156
NC_011274:3799696:3815052381505238170281977Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-31132
NC_011205:4038884:404023040402304040523294Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-21101
NC_016832:3798475:381551938155193815653135Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1684.7