Pre_GI: BLASTP Hits

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Query: NC_012125:2826624:2857829 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2857829, End: 2858764, Length: 936

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2857699:287729728772972878232936Salmonella enterica subsp. enterica serovar Choleraesuis strIroE0645
NC_011094:2791719:282973428297342830669936Salmonella enterica subsp. enterica serovar Schwarzengrund strIroE0636
NC_011083:2847318:289712228971222898057936Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IroE9e-179625
NC_003197:2894344:292261229226122923547936Salmonella typhimurium LT2, complete genomeputative hydrolase9e-179625
NC_016810:2943912:294518829451882946123936Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-179625
NC_016856:2896630:294284729428472943782936Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrolase9e-179625
NC_016857:2943912:294518829451882946123936Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative hydrolase9e-179625
NC_016860:2917910:294617829461782947113936Salmonella enterica subsp. enterica serovar Typhimurium strIroE9e-179625
NC_016863:2844883:289110028911002892035936Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative hydrolase9e-179625
NC_017046:2943929:294392929439292944864936Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-179625
NC_011149:2829811:283108728310872832022936Salmonella enterica subsp. enterica serovar Agona str. SL483,IroE2e-178624
NC_011294:2802502:280754428075442808473930Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-178623
NC_016831:2779864:278490727849072785836930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-178623
NC_011080:2897977:289925328992532900188936Salmonella enterica subsp. enterica serovar Newport str. SL254,IroE6e-178623
NC_010102:2881714:288675328867532887688936Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-178623
NC_011205:2962270:296731229673122968241930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-178623
NC_011274:2793355:279839827983982799327930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-177619
NC_016832:2743801:274884327488432749760918Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-174612
NC_004631:2755306:276154427615442762461918Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-174612
NC_003198:2769449:277568727756872776604918Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-174612
NC_010067:171053:185128185128186075948Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-151535
NC_011747:86000:102058102058103014957Escherichia coli S88 plasmid pECOS88, complete sequenceIroE, putative hydrolase3e-103375
NC_016612:5208936:522515952251595226088930Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-81303
NC_020064:3609844:364670036467003647626927Serratia marcescens FGI94, complete genomeputative hydrolase of alpha/beta superfamily1e-43177
NC_017986:3283433:328443532844353285328894Pseudomonas putida ND6 chromosome, complete genomeesterase4e-38158
NC_020211:4484817:449663344966334497547915Serratia marcescens WW4, complete genomeesterase6e-36151
NC_009524:1796000:181389318138931814882990Psychrobacter sp. PRwf-1 chromosome, complete genomealpha/beta fold family hydrolase-like protein4e-24112
NC_009937:3748885:375190337519033752757855Azorhizobium caulinodans ORS 571, complete genomeputative esterase3e-1789.4
NC_017517:1915842:193143019314301932362933Neisseria meningitidis M01-240355 chromosome, complete genomeesterase family protein4e-1685.5
NC_017501:1913360:192949019294901930422933Neisseria meningitidis 8013, complete genomehypothetical protein4e-1685.5
NC_013016:354000:358920358920359852933Neisseria meningitidis alpha14 chromosome, complete genomeputative esterase2e-1583.2
NC_020211:996497:102886310288631029642780Serratia marcescens WW4, complete genomehypothetical protein6e-1168.6