Pre_GI: BLASTP Hits

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Query: NC_012125:2143246:2158458 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2158458, End: 2158859, Length: 402

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1671428:167779016777901678191402Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative dipicolinate reductase5e-60229
NC_016856:1723236:172959817295981729999402Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative dipicolinate reductase5e-60229
NC_016810:1670112:167647416764741676875402Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-60229
NC_011294:1493849:150906315090631509464402Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-60229
NC_011274:1544653:155986915598691560270402Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-60229
NC_006905:1726416:173277817327781733179402Salmonella enterica subsp. enterica serovar Choleraesuis strputative dipicolinate reductase5e-60229