Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1339951 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1339951, End: 1340076, Length: 126

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2529750:259338625933862593679294Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1477.8
NC_011205:609464:622062622062622355294Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853anti-RecBCD protein 29e-1475.5
NC_013364:2645438:265609726560972656390294Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-1373.9
NC_013364:1183000:118869411886941188987294Escherichia coli O111:H- str. 11128, complete genomeputative anti-RecBCD protein22e-1373.9
NC_011601:2614691:262642126264212626714294Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeanti-RecBCD protein8e-1372.4
NC_013361:3287671:330047133004713300764294Escherichia coli O26:H11 str. 11368 chromosome, complete genomeABC transporter ATP-binding protein8e-1372.4
NC_011094:593100:605219605219605512294Salmonella enterica subsp. enterica serovar Schwarzengrund stranti-RecBCD protein 28e-1372.4
NC_016860:364981:372598372598372891294Salmonella enterica subsp. enterica serovar Typhimurium stranti-RecBCD protein 22e-1270.9
NC_011601:1039500:104696610469661047259294Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeanti-RecBCD protein2e-1270.9
NC_011601:717072:725216725216725512297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeanti-RecBCD protein2e-1167.4
NC_007946:2625461:263493726349372635233297Escherichia coli UTI89, complete genomehypothetical protein2e-1167.4
NC_011083:374000:381497381497381793297Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,anti-RecBCD protein 29e-1062.4
NC_013361:1558423:156534015653401565636297Escherichia coli O26:H11 str. 11368 chromosome, complete genomeABC transporter ATP-binding protein2e-0754.7