Pre_GI: BLASTP Hits

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Query: NC_011989:594353:595963 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 595963, End: 596295, Length: 333

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009999:38832:489754897549244270Shewanella baltica OS195 plasmid pS19502, complete sequencehypothetical protein2e-0961.2
NC_012791:4794362:481008448100844810350267Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-0858.2
NC_007086:396723:413352413352413600249Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-0754.7
NC_010688:387000:400600400600400848249Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-0754.7
NC_003902:396000:412758412758413006249Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-0754.7
NC_003902:396000:405106405106405354249Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-0754.7
NC_007086:396723:405691405691405939249Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-0754.7