Pre_GI: BLASTP Hits

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Query: NC_011989:2549252:2559373 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2559373, End: 2560581, Length: 1209

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013739:2106662:2115697211569721170161320Conexibacter woesei DSM 14684, complete genomehypothetical protein1e-27124
NC_015675:2247960:2253933225393322551201188Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein7e-1788.6
NC_007761:1097531:1103398110339811047141317Rhizobium etli CFN 42, complete genomehypothetical protein8e-1581.6
NC_020126:1873794:189199418919941892980987Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1273.2