Pre_GI: BLASTP Hits

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Query: NC_011988:1036618:1062701 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 1062701, End: 1063960, Length: 1260

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013194:2115000:2127514212751421291871674Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeFHA domain containing protein5e-0859.3
NC_004605:1092476:1101720110172011029161197Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein4e-0756.2