Pre_GI: BLASTP Hits

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Query: NC_011979:646518:669160 Geobacter sp. FRC-32, complete genome

Start: 669160, End: 669624, Length: 465

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010718:517473:537139537139537864726Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA repair protein RadC2e-23108
NC_011761:292903:308577308577309251675Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA repair protein RadC2e-1994.7
NC_011206:469901:487091487091487765675Acidithiobacillus ferrooxidans ATCC 53993, complete genomeDNA repair protein RadC2e-1994.7
NC_018876:2604055:262305726230572623746690Methanolobus psychrophilus R15 chromosome, complete genomeDNA repair protein RadC6e-1993.2
NC_007912:4661141:466260946626094663283675Saccharophagus degradans 2-40, complete genomeDEAD/DEAH box helicase-like2e-1891.3
NC_016745:675909:677227677227677901675Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein3e-1890.5
NC_015437:438538:465545465545466234690Selenomonas sputigena ATCC 35185 chromosome, complete genomeDNA repair protein RadC1e-1789
NC_015966:2841420:285394328539432854680738Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeDNA repair protein RadC2e-1787.8
NC_009633:2350892:235754423575442358242699Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA repair protein RadC1e-1685.1
NC_011658:4243561:424944642494464250123678Bacillus cereus AH187 chromosome, complete genomeDNA repair protein RadC3e-1684
NC_011969:4140000:414737041473704148047678Bacillus cereus Q1 chromosome, complete genomeDNA repair protein radc3e-1684
NC_016771:4195888:420322942032294203906678Bacillus cereus NC7401, complete genomeDNA repair protein RadC3e-1684
NC_003997:4252000:425946542594654260142678Bacillus anthracis str. Ames, complete genomeDNA repair protein RadC3e-1684
NC_012472:4255729:426419942641994264876678Bacillus cereus 03BB102, complete genomeDNA repair protein RadC3e-1684
NC_007530:4251773:425959242595924260269678Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA repair protein RadC3e-1684
NC_014335:4181710:419018041901804190857678Bacillus cereus biovar anthracis str. CI chromosome, completeDNA repair protein3e-1684
NC_005945:4251789:425996442599644260641678Bacillus anthracis str. Sterne, complete genomeDNA repair protein RadC3e-1684
NC_005957:4244019:424905242490524249729678Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA repair protein RadC3e-1684
NC_012659:4252000:425949242594924260169678Bacillus anthracis str. A0248, complete genomeDNA repair protein RadC3e-1684
NC_017200:4267408:427244042724404273117678Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein5e-1683.6
NC_016779:4217171:421717142171714217722552Bacillus cereus F837/76 chromosome, complete genomeDNA repair protein RadC4e-1683.6
NC_008600:4263505:426584242658424266468627Bacillus thuringiensis str. Al Hakam, complete genomeDNA repair protein4e-1683.6
NC_018691:198909:203019203019203693675Alcanivorax dieselolei B5 chromosome, complete genomeDNA repair protein RadC4e-1683.6
NC_003909:4209385:421273742127374213414678Bacillus cereus ATCC 10987, complete genomeDNA repair protein RadC6e-1683.2
NC_011772:4397599:439759943975994398276678Bacillus cereus G9842, complete genomeDNA repair protein RadC6e-1683.2
NC_011773:4296082:429728142972814297841561Bacillus cereus AH820 chromosome, complete genomeDNA repair protein7e-1682.8
NC_006274:4295730:430390443039044304581678Bacillus cereus E33L, complete genomeDNA repair protein RadC7e-1682.8
NC_004722:4405363:440536344053634405914552Bacillus cereus ATCC 14579, complete genomeDNA repair protein radC1e-1582.4
NC_010184:4287999:429533742953374296014678Bacillus weihenstephanensis KBAB4, complete genomeDNA repair protein RadC1e-1582
NC_014171:4317520:432015043201504320827678Bacillus thuringiensis BMB171 chromosome, complete genomeDNA repair protein radC1e-1582
NC_011725:4428726:442990344299034430580678Bacillus cereus B4264 chromosome, complete genomeDNA repair protein RadC1e-1582
NC_019897:2645404:265060326506032651292690Thermobacillus composti KWC4 chromosome, complete genomeDNA repair protein radc2e-1581.3
NC_009089:1329826:134234613423461343053708Clostridium difficile 630, complete genomeDNA repair protein8e-1579.3
NC_011661:906583:907417907417908103687Dictyoglomus turgidum DSM 6724, complete genomeDNA repair protein RadC4e-1477
NC_013446:4281250:429934642993464300038693Comamonas testosteroni CNB-2, complete genomeDNA repair protein RadC6e-1476.6
NC_017179:1197763:121033112103311210990660Clostridium difficile BI1, complete genomeDNA repair protein7e-1476.3
NC_013315:1187986:120055412005541201213660Clostridium difficile CD196 chromosome, complete genomeDNA repair protein7e-1476.3
NC_013316:1186156:119817011981701198829660Clostridium difficile R20291, complete genomeDNA repair protein7e-1476.3
NC_012968:381771:398518398518399192675Methylotenera mobilis JLW8, complete genomeDNA repair protein RadC1e-1375.9
NC_008255:1701195:172317917231791723880702Cytophaga hutchinsonii ATCC 33406, complete genomeDNA repair protein8e-1372.8
NC_014166:1424754:142931714293171429979663Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeDNA repair protein RadC2e-1271.6
NC_013037:6209424:621215862121586212862705Dyadobacter fermentans DSM 18053, complete genomeDNA repair protein RadC2e-1271.6
NC_017295:1375180:138075213807521381441690Clostridium acetobutylicum EA 2018 chromosome, complete genomeDNA repair protein RadC3e-1270.5
NC_003030:1375764:138133613813361382025690Clostridium acetobutylicum ATCC 824, complete genomeDNA repair protein RadC3e-1270.5
NC_015687:1377367:138293913829391383628690Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA repair protein RadC3e-1270.5
NC_008260:228475:232968232968233642675Alcanivorax borkumensis SK2, complete genomeDNA repair protein RadC homolog8e-1269.3
NC_016584:5388500:540973654097365410419684Desulfosporosinus orientis DSM 765 chromosome, complete genomeDNA repair protein radc9e-1269.3
NC_009617:588897:591420591420592109690Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA repair protein RadC1e-1168.6
NC_014931:5088125:511832051183205118997678Variovorax paradoxus EPS chromosome, complete genomeDNA repair protein RadC3e-1167.4
NC_009706:830461:865385865385866071687Clostridium kluyveri DSM 555 chromosome, complete genomeDNA repair protein RadC5e-1167
NC_016816:127802:146407146407147063657Pantoea ananatis LMG 5342, complete genomeDNA repair protein RadC4e-1167
NC_016513:689689:702586702586703230645Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA repair protein RadC2e-1065.1
NC_013416:386301:399197399197399856660Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDNA repair protein RadC2e-1065.1
NC_010102:3851500:387162738716273872466840Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1063.9
NC_007606:3784847:380416038041603804834675Shigella dysenteriae Sd197, complete genomeDNA repair protein4e-1063.9
NC_016856:3916500:393637239363723937211840Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA repair protein RadC3e-1063.9
NC_011094:3778000:379876637987663799431666Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA repair protein RadC5e-1063.5
NC_012913:2189862:219326621932662193925660Aggregatibacter aphrophilus NJ8700, complete genomeDNA repair protein RadC5e-1063.5
NC_011149:3822000:384204738420473842712666Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA repair protein RadC5e-1063.5
NC_004631:3910451:391045139104513911116666Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDNA repair protein RadC5e-1063.5
NC_003198:3924952:392495239249523925617666Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA repair protein RadC5e-1063.5
NC_003197:3902500:392268039226803923345666Salmonella typhimurium LT2, complete genomeDNA repair protein RadC5e-1063.5
NC_011083:3915500:393569039356903936355666Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA repair protein RadC5e-1063.5
NC_006905:3845000:386498038649803865645666Salmonella enterica subsp. enterica serovar Choleraesuis strDNA repair protein RadC5e-1063.5
NC_011205:3942500:396238139623813963046666Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA repair protein RadC5e-1063.5
NC_011274:3894387:389438738943873895052666Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA repair protein RadC5e-1063.5
NC_011294:3782655:380378438037843804449666Salmonella enterica subsp. enterica serovar Enteritidis strDNA repair protein RadC5e-1063.5
NC_012125:3840000:385983538598353860500666Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA repair protein RadC5e-1063.5
NC_016810:3923988:394399439439943944659666Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA repair protein5e-1063.5
NC_016831:3875134:387513438751343875799666Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative DNA repair protein5e-1063.5
NC_016857:3924000:394399539439953944660666Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA repair protein RadC5e-1063.5
NC_016860:3925500:394557639455763946241666Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein RadC5e-1063.5
NC_016863:3864000:388397938839793884644666Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA repair protein RadC5e-1063.5
NC_017046:3923000:394282139428213943486666Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein5e-1063.5
NC_014328:794000:800328800328801020693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeDNA repair protein, RadC family4e-1063.5
NC_013364:4460500:447929244792924479960669Escherichia coli O111:H- str. 11128, complete genomereplication fork protein6e-1063.2
NC_010498:4031500:404991240499124050580669Escherichia coli SMS-3-5, complete genomeDNA repair protein RadC8e-1062.8
NC_011751:4251296:427116942711694271837669Escherichia coli UMN026 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_011748:4167043:418691341869134187581669Escherichia coli 55989, complete genomeDNA repair protein RadC8e-1062.8
NC_011750:4307166:432681143268114327479669Escherichia coli IAI39 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_004337:3761865:378220537822053782873669Shigella flexneri 2a str. 301, complete genomeDNA repair protein RadC8e-1062.8
NC_004741:3992384:399238439923843993052669Shigella flexneri 2a str. 2457T, complete genomeDNA repair protein RadC8e-1062.8
CU928145:4167043:418691341869134187581669Escherichia coli 55989 chromosome, complete genomeprotein associated with replication fork, putative DNA repair protein8e-1062.8
CP002185:3998112:401776040177604018428669Escherichia coli W, complete genomeprotein associated with replication fork, possible DNA repair protein8e-1062.8
CU928160:3862935:388257438825743883242669Escherichia coli IAI1 chromosome, complete genomeprotein associated with replication fork, putative DNA repair protein8e-1062.8
NC_011740:4007000:402860240286024029270669Escherichia fergusonii ATCC 35469, complete genomeprotein associated with replication fork, putative DNA repair protein8e-1062.8
NC_004337:3590323:378220537822053782873669Shigella flexneri 2a str. 301, complete genomeDNA repair protein RadC8e-1062.8
NC_009801:4108179:412782741278274128495669Escherichia coli E24377A, complete genomeDNA repair protein RadC8e-1062.8
NC_011745:4226186:424605542460554246723669Escherichia coli ED1a chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_010658:3774110:379471337947133795381669Shigella boydii CDC 3083-94, complete genomeDNA repair protein RadC8e-1062.8
NC_012967:3729813:375024637502463750914669Escherichia coli B str. REL606 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_008253:3896704:391636139163613917005645Escherichia coli 536, complete genomeDNA repair protein RadC8e-1062.8
AP010958:4668181:466818146681814668849669Escherichia coli O103:H2 str. 12009 DNA, complete genomeprotein associated with replication fork8e-1062.8
NC_011353:4639002:465885446588544659522669Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_011601:4036590:405826140582614058929669Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_011415:4040211:406008140600814060755675Escherichia coli SE11 chromosome, complete genomeDNA repair protein RadC7e-1062.8
NC_011080:3875320:389583138958313896496666Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA repair protein RadC7e-1062.8
NC_009800:3821824:384147238414723842140669Escherichia coli HS, complete genomeDNA repair protein RadC7e-1062.8
NC_007613:3637832:365748936574893658163675Shigella boydii Sb227, complete genomeDNA repair protein8e-1062.8
NC_017328:3794105:381440538144053815079675Shigella flexneri 2002017 chromosome, complete genomeDNA repair protein8e-1062.8
NC_013941:4427000:444569544456954446369675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA repair protein8e-1062.8
NC_002655:4606000:462473346247334625407675Escherichia coli O157:H7 EDL933, complete genomeDNA repair protein RadC8e-1062.8
NC_008563:4083558:410321541032154103889675Escherichia coli APEC O1, complete genomeDNA repair protein RadC8e-1062.8
NC_007946:4050762:407041940704194071093675Escherichia coli UTI89, complete genomeDNA repair protein8e-1062.8
NC_011741:3862935:388257438825743883242669Escherichia coli IAI1 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_011742:3998285:401794240179424018610669Escherichia coli S88 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_013008:4595043:461489546148954615563669Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_013353:4668181:466818146681814668849669Escherichia coli O103:H2 str. 12009, complete genomeprotein associated with replication fork8e-1062.8
NC_013361:4991020:499102049910204991688669Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA repair protein RadC8e-1062.8
NC_004431:4223232:424288942428894243563675Escherichia coli CFT073, complete genomeDNA repair protein RadC8e-1062.8
NC_002695:4537000:455575045557504556424675Escherichia coli O157:H7 str. Sakai, complete genomeDNA repair protein RadC8e-1062.8
AC_000091:3827856:382785638278563828524669Escherichia coli W3110 DNA, complete genomeprotein associated with replication fork, possible DNA repair protein1e-0962.4
NC_000913:3786124:380991438099143810582669Escherichia coli K12, complete genomeDNA repair protein RadC1e-0962.4
NC_010473:3883701:390749139074913908159669Escherichia coli str. K-12 substr. DH10B, complete genomeprotein associated with replication fork, possible DNA repair protein1e-0962.4
NC_012759:3675396:369824036982403698908669Escherichia coli BW2952 chromosome, complete genomeDNA repair protein RadC1e-0962.4
NC_006511:3690828:371133937113393712004666Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCDNA repair protein RadC1e-0962.4
NC_011147:3686500:370700937070093707674666Salmonella enterica subsp. enterica serovar Paratyphi A strDNA repair protein RadC1e-0962.4
NC_015761:3611993:363251936325193633184666Salmonella bongori NCTC 12419, complete genomeDNA repair protein1e-0962.4
NC_013216:1442044:144361114436111444294684Desulfotomaculum acetoxidans DSM 771, complete genomeDNA repair protein RadC1e-0962
NC_021182:2160580:216503121650312165717687Clostridium pasteurianum BC1, complete genomeDNA repair protein radc1e-0962
NC_003910:187630:193642193642194136495Colwellia psychrerythraea 34H, complete genomeDNA repair protein RadC, n-terminal fragment1e-0962
NC_011296:1151346:115977911597791160447669Thermodesulfovibrio yellowstonii DSM 11347, complete genomeDNA repair protein RadC3e-0960.8
NC_011283:105245:121974121974122639666Klebsiella pneumoniae 342 chromosome, complete genomeDNA repair protein RadC4e-0960.5
NC_016845:5162481:516293451629345163599666Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA repair protein RadC5e-0960.1
NC_012731:5074000:507405450740545074719666Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA repair protein RadC5e-0960.1
NC_009648:4359875:435987543598754360540666Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA repair protein RadC5e-0960.1
NC_013850:109500:127170127170127835666Klebsiella variicola At-22 chromosome, complete genomeDNA repair protein RadC6e-0959.7
NC_010003:1577934:157855915785591579227669Petrotoga mobilis SJ95, complete genomeDNA repair protein RadC1e-0858.9
NC_010730:627465:647288647288647977690Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA repair protein RadC2e-0858.2
NC_012563:3416509:343368934336893434375687Clostridium botulinum A2 str. Kyoto, complete genomeDNA repair protein, RadC family2e-0857.8
NC_010516:3234791:325519432551943255880687Clostridium botulinum B1 str. Okra, complete genomeDNA repair protein, RadC family2e-0857.8
NC_021175:964224:968398968398969081684Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein4e-0857.4
NC_009699:3217315:323771832377183238404687Clostridium botulinum F str. Langeland chromosome, complete genomeDNA repair protein RadC4e-0857
NC_009828:469778:471177471177471854678Thermotoga lettingae TMO, complete genomeDNA repair protein RadC6e-0856.6
NC_013971:73037:102651102651103322672Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA repair protein1e-0755.1
NC_013961:73037:102651102651103322672Erwinia amylovora, complete genomeGlutaredoxin 31e-0755.1
NC_008609:2446246:245329824532982453798501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC2e-0754.7
NC_008258:3995553:399555339955533996182630Shigella flexneri 5 str. 8401, complete genomeDNA repair protein3e-0753.9
NC_009792:4658909:467717646771764677838663Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0753.9
NC_008609:1976403:203671820367182037218501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC7e-0753.1
NC_004547:164000:166978166978167643666Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeDNA repair protein RadC5e-0753.1
NC_010814:243384:249940249940250431492Geobacter lovleyi SZ, complete genomeDNA repair protein RadC3e-0651.2
NC_021184:1484352:148539614853961486004609Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA repair protein radc3e-0650.8
NC_002939:2337402:238214023821402382631492Geobacter sulfurreducens PCA, complete genomeDNA repair protein RadC3e-0650.8
NC_002939:2315402:238214023821402382631492Geobacter sulfurreducens PCA, complete genomeDNA repair protein RadC3e-0650.8
NC_008609:206313:211797211797212288492Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC4e-0650.4