Pre_GI: BLASTP Hits

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Query: NC_011961:891815:901733 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 901733, End: 902740, Length: 1008

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009485:1648896:1668543166854316695681026Bradyrhizobium sp. BTAi1 chromosome, complete genomemethane/phenol/toluene hydroxylase6e-89327
NC_015312:6398931:6416255641625564172771023Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemethane/phenol/toluene hydroxylase2e-62239
NC_008825:2700617:270938027093802710366987Methylibium petroleiphilum PM1, complete genometoluene monooxygenase beta subunit4e-43175
NC_015312:1220500:1232166123216612331851020Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemethane/phenol/toluene hydroxylase7e-41167
NC_007973:1411714:142810714281071429093987Ralstonia metallidurans CH34 chromosome 1, complete sequencemethane/phenol/toluene hydroxylase3e-40165
NC_015312:848403:8615078615078625591053Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemethane/phenol/toluene hydroxylase9e-40164
NC_008825:846916:858666858666859652987Methylibium petroleiphilum PM1, complete genometoluene monooxygenase beta subunit2e-39162
NC_016147:730810:738412738412739398987Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeToluene-4-monooxygenase system protein E7e-39161
NC_009376:483307:4866034866034877391137Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemethane/phenol/toluene hydroxylase1e-37157
NC_017276:337286:3492603492603503901131Sulfolobus islandicus REY15A chromosome, complete genomemethane/phenol/toluene hydroxylase2e-32140
NC_002754:1061851:1068850106885010699801131Sulfolobus solfataricus P2, complete genomeToluene-4-monooxygenase system protein E. (tmoE)3e-32139
NC_012726:346539:3582803582803594101131Sulfolobus islandicus M.16.4 chromosome, complete genomemethane/phenol/toluene hydroxylase4e-31135
NC_013769:316789:3468373468373479671131Sulfolobus islandicus L.D.8.5 chromosome, complete genomemethane/phenol/toluene hydroxylase4e-31135
NC_017275:377800:3888633888633899931131Sulfolobus islandicus HVE10/4 chromosome, complete genomemethane/phenol/toluene hydroxylase4e-31135
NC_012589:347020:3585363585363596781143Sulfolobus islandicus L.S.2.15, complete genomemethane/phenol/toluene hydroxylase2e-30133
NC_016604:2944555:2953708295370829547601053Mycobacterium rhodesiae NBB3 chromosome, complete genomeMethane/Phenol/Toluene Hydroxylase5e-1065.5
NC_008697:118859:1331051331051341541050Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceMethane monooxygenase6e-0755.1
NC_007777:2964500:2974379297437929754821104Frankia sp. CcI3, complete genomemethane/phenol/toluene hydroxylase4e-0652.8