Pre_GI: BLASTP Hits

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Query: NC_011961:891815:901025 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 901025, End: 901390, Length: 366

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008825:2700617:270866727086672709002336Methylibium petroleiphilum PM1, complete genomebenzene/toluene monooxygenase ferredoxin subunit6e-1682.8
NC_015312:1220500:123144512314451231798354Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein5e-1579.7
NC_008825:846916:857944857944858279336Methylibium petroleiphilum PM1, complete genomebenzene/toluene monooxygenase ferredoxin subunit7e-1579.3
NC_015312:848403:861181861181861507327Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein9e-1579
NC_007973:1411714:142950314295031429838336Ralstonia metallidurans CH34 chromosome 1, complete sequenceRieske (2Fe-2S) region4e-1373.6
NC_016147:730810:739801739801740136336Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeToluene-4-monooxygenase system protein C2e-1271.2
NC_009376:483307:488065488065488448384Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein2e-1270.9
NC_002754:1061851:106810910681091068513405Sulfolobus solfataricus P2, complete genomeToluene-4-monooxygenase system protein C. (tmoC)1e-0858.5
NC_017276:337286:348517348517348921405Sulfolobus islandicus REY15A chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0858.5
NC_012726:346539:357537357537357941405Sulfolobus islandicus M.16.4 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0858.5
NC_017275:377800:388120388120388524405Sulfolobus islandicus HVE10/4 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0858.2
NC_013769:316789:346094346094346498405Sulfolobus islandicus L.D.8.5 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0858.2
NC_012589:347020:357805357805358209405Sulfolobus islandicus L.S.2.15, complete genomeRieske (2Fe-2S) domain protein1e-0858.2