Pre_GI: BLASTP Hits

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Query: NC_011961:891815:899218 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 899218, End: 900711, Length: 1494

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007973:1411714:1430229143022914317311503Ralstonia metallidurans CH34 chromosome 1, complete sequencemethane/phenol/toluene hydroxylase2e-161569
NC_016147:730810:7404707404707419571488Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemethane/phenol/toluene hydroxylase:YHS1e-157556
NC_008825:846916:8560618560618575601500Methylibium petroleiphilum PM1, complete genometoluene monooxygenase alpha subunit3e-153541
NC_015312:1220500:1229547122954712310641518Pseudonocardia dioxanivorans CB1190 chromosome, complete genomePhenol 2-monooxygenase6e-130464
NC_015312:848403:8631758631758647071533Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemethane/phenol/toluene hydroxylase5e-127454
NC_012726:346539:355209355209356015807Sulfolobus islandicus M.16.4 chromosome, complete genomemethane/phenol/toluene hydroxylase1e-53211
NC_013769:316789:343766343766344572807Sulfolobus islandicus L.D.8.5 chromosome, complete genomemethane/phenol/toluene hydroxylase1e-53211
NC_017275:377800:385793385793386599807Sulfolobus islandicus HVE10/4 chromosome, complete genomemethane/phenol/toluene hydroxylase1e-53211
NC_017276:337286:346109346109346915807Sulfolobus islandicus REY15A chromosome, complete genomemethane/phenol/toluene hydroxylase1e-53211
NC_009376:483307:490965490965491756792Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemethane/phenol/toluene hydroxylase9e-54211
NC_012589:347020:355477355477356283807Sulfolobus islandicus L.S.2.15, complete genomemethane/phenol/toluene hydroxylase2e-53210
NC_002754:1061851:106579210657921066598807Sulfolobus solfataricus P2, complete genomeToluene-4-monooxygenase system protein A. amino end fragment (tmoA)1e-52207
NC_009376:483307:488858488858489790933Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein6e-49195
NC_017276:337286:347134347134348072939Sulfolobus islandicus REY15A chromosome, complete genomeYHS domain-containing protein5e-38159
NC_012589:347020:356422356422357360939Sulfolobus islandicus L.S.2.15, complete genomeYHS domain protein1e-37158
NC_017275:377800:386743386743387675933Sulfolobus islandicus HVE10/4 chromosome, complete genomeYHS domain-containing protein1e-37158
NC_002754:1061851:106673210667321067664933Sulfolobus solfataricus P2, complete genomeToluene-4-monooxygenase system protein A. carboxy end fragment (tmoA)1e-37158
NC_013769:316789:344711344711345649939Sulfolobus islandicus L.D.8.5 chromosome, complete genomeYHS domain-containing protein1e-37157
NC_012726:346539:356154356154357092939Sulfolobus islandicus M.16.4 chromosome, complete genomeYHS domain-containing protein2e-37157
NC_008697:118859:1312501312501327551506Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceMethane monooxygenase7e-34145
NC_007973:1411714:1440486144048614420451560Ralstonia metallidurans CH34 chromosome 1, complete sequencemethane/phenol/toluene hydroxylase4e-31136
NC_016147:730810:7448567448567464151560Pseudoxanthomonas spadix BD-a59 chromosome, complete genometoluene hydroxylase P3 protein6e-31135
NC_016604:2944555:2955160295516029566621503Mycobacterium rhodesiae NBB3 chromosome, complete genomeMethane/Phenol/Toluene Hydroxylase7e-29129
NC_014098:1553900:1561844156184415634691626Bacillus tusciae DSM 2912 chromosome, complete genomemethane/phenol/toluene hydroxylase2e-26120
NC_015312:681678:6879926879926896441653Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemethane monooxygenase2e-24114
NC_007777:2964500:2976786297678629784351650Frankia sp. CcI3, complete genomeMethane monooxygenase1e-21104
NC_008825:2700617:270789127078912708283393Methylibium petroleiphilum PM1, complete genometoluene monooxygenase alpha subunit1e-20101