Pre_GI: BLASTP Hits

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Query: NC_011961:891815:894085 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 894085, End: 894489, Length: 405

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002754:1968668:197467319746731975056384Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1685.5
NC_017275:2615814:262269726226972623062366Sulfolobus islandicus HVE10/4 chromosome, complete genomehypothetical protein2e-1581.3
NC_017276:2481083:248894224889422489307366Sulfolobus islandicus REY15A chromosome, complete genomehypothetical protein2e-1581.3
NC_012589:2698556:270391927039192704284366Sulfolobus islandicus L.S.2.15, complete genomehypothetical protein2e-1581.3
NC_012588:2567102:257647625764762576841366Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein2e-1581.3
NC_012622:2662428:266970526697052670070366Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehypothetical protein2e-1581.3
NC_012623:2774910:277981227798122780177366Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein2e-1581.3
NC_012632:2654200:266004526600452660410366Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein2e-1581.3
NC_012726:2549813:255429025542902554655366Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein2e-1581.3
NC_013769:2685000:268967926896792690044366Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein2e-1581.3
NC_008536:1462344:147492714749271475367441Solibacter usitatus Ellin6076, complete genomehypothetical protein1e-1478.2
NC_015587:583530:585851585851586249399Hydrogenobaculum sp. SHO chromosome, complete genomeProtein of unknown function DUF22039e-1062.4
NC_015557:583475:585796585796586194399Hydrogenobaculum sp. 3684 chromosome, complete genomeProtein of unknown function DUF22039e-1062.4
NC_020411:583503:585824585824586222399Hydrogenobaculum sp. HO, complete genomeProtein of unknown function DUF22039e-1062.4