Pre_GI: BLASTP Hits

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Query: NC_011961:85083:108456 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 108456, End: 108878, Length: 423

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:1255956:127683012768301277219390Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCRISPR-associated protein, Cmr5 family3e-1063.9
NC_014410:937599:961029961029961631603Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CRISPR-associated protein, Cmr5 family4e-1063.5
NC_013894:1:925792579640384Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated protein, Cmr5 family1e-0755.1
NC_011899:1603500:161473116147311615144414Halothermothrix orenii H 168, complete genomeCRISPR-associated protein, Cmr5 family6e-0649.7