Pre_GI: BLASTP Hits

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Query: NC_011959:972798:996327 Thermomicrobium roseum DSM 5159, complete genome

Start: 996327, End: 997637, Length: 1311

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003364:756813:7786477786477799841338Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein4e-46186
NC_015474:1035834:1051262105126210525691308Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-41170
NC_000961:435489:4488644488644501861323Pyrococcus horikoshii OT3, complete genomehypothetical protein5e-41169
NC_000868:1502276:1504351150435115056581308Pyrococcus abyssi GE5, complete genomehypothetical protein4e-40166
NC_010003:570643:5860115860115872581248Petrotoga mobilis SJ95, complete genomeHydroxypyruvate reductase1e-39164
NC_009633:712500:7164037164037186342232Alkaliphilus metalliredigens QYMF chromosome, complete genomeD-isomer specific 2-hydroxyacid dehydrogenase1e-35151
NC_015578:2428500:2447403244740324486501248Treponema primitia ZAS-2 chromosome, complete genomeputative hydroxypyruvate reductase1e-32140
NC_007626:3393940:3436800343680034380801281Magnetospirillum magneticum AMB-1, complete genomePutative glycerate kinase2e-32140
NC_016051:81685:1020331020331033881356Thermococcus sp. AM4 chromosome, complete genomeD-glycerate 2-kinase5e-32139
NC_006513:2708213:2727335272733527286091275Azoarcus sp. EbN1, complete genomehydroxypyruvate reductase4e-31136
NC_014374:1013184:1023854102385410251731320Acidilobus saccharovorans 345-15 chromosome, complete genomeGlycerate kinase1e-30134
NC_013922:799186:8143348143348158241491Natrialba magadii ATCC 43099 chromosome, complete genomeHydroxypyruvate reductase2e-29130
NC_007614:2517226:2533227253322725345821356Nitrosospira multiformis ATCC 25196 chromosome 1, completeHydroxypyruvate reductase3e-24113
NC_015944:162233:1636131636131649471335Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequencehydroxypyruvate reductase; glycerate kinase4e-2099.4
NC_012527:288207:2891412891412904121272Deinococcus deserti VCD115 plasmid 1, complete sequencehydroxypyruvate reductase1e-1687.8
NC_012622:1333000:1354002135400213552041203Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehydroxypyruvate reductase3e-1686.7
NC_007406:632436:6338516338516351371287Nitrobacter winogradskyi Nb-255, complete genomehypothetical protein6e-1685.5
NC_007964:717590:7191637191637204491287Nitrobacter hamburgensis X14, complete genomeHydroxypyruvate reductase9e-1581.6
NC_010172:798923:831654831654832361708Methylobacterium extorquens PA1, complete genomeHydroxypyruvate reductase1e-1171.2
NC_012988:769981:805308805308806012705Methylobacterium extorquens DM4, complete genome2e-1067.4