Pre_GI: BLASTP Hits

Some Help

Query: NC_011959:815601:828946 Thermomicrobium roseum DSM 5159, complete genome

Start: 828946, End: 829473, Length: 528

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011565:1022000:1033104103310410342761173Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative M23 family peptidase2e-1065.5
NC_012440:1874896:188539818853981886291894Persephonella marina EX-H1, complete genomepeptidase, M23/M37 family2e-1065.1
NC_009379:435404:4538144538144552681455Polynucleobacter sp. QLW-P1DMWA-1, complete genomepeptidase M23B4e-1063.9
NC_013162:1176000:117649711764971177471975Capnocytophaga ochracea DSM 7271, complete genomePeptidase M235e-1063.9
NC_015844:3580591:358815135881513588705555Zobellia galactanivorans, complete genomemetallopeptidase1e-0962.8
NC_003919:4568892:4583700458370045851181419Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-0960.1
NC_016582:5987039:600948660094866010121636Streptomyces bingchenggensis BCW-1 chromosome, complete genomesecreted peptidase7e-0960.1
NC_004556:151593:1676651676651690801416Xylella fastidiosa Temecula1, complete genomemetallopeptidase7e-0960.1
NC_010577:151926:1675971675971690121416Xylella fastidiosa M23, complete genomePeptidase M237e-0960.1
NC_007508:4593446:4608209460820946096271419Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomemembrane-bound metalloendopeptidase8e-0960.1
NC_010717:4851000:4865052486505248664701419Xanthomonas oryzae pv. oryzae PXO99A, complete genomemembrane-bound metalloendopeptidase1e-0859.3
NC_015921:272517:2738112738112750641254Borrelia bissettii DN127 chromosome, complete genomelysM domain-containing protein2e-0858.9
NC_012913:280506:3077793077793091161338Aggregatibacter aphrophilus NJ8700, complete genomeNlpD protein2e-0858.5
NC_017238:272980:2743692743692756221254Borrelia afzelii PKo chromosome, complete genomelysM domain protein5e-0857
NC_008277:272741:2741302741302753831254Borrelia afzelii PKo, complete genomehypothetical protein5e-0857
NC_005125:839000:8417518417518429201170Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0857
NC_005956:1572500:1585477158547715874832007Bartonella henselae str. Houston-1, complete genomehypothetical protein6e-0857
NC_006156:271410:2740192740192752721254Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein7e-0857
NC_008262:227354:2306182306182318171200Clostridium perfringens SM101, complete genomepeptidase, M23/M37 family9e-0856.6
NC_008789:942309:9555549555549570651512Halorhodospira halophila SL1, complete genomepeptidase M23B8e-0856.6
NC_001318:270488:2752432752432764961254Borrelia burgdorferi B31, complete genomehypothetical protein8e-0856.6
NC_011728:269853:2746112746112758641254Borrelia burgdorferi ZS7, complete genomepeptidase M238e-0856.6
NC_008261:225425:2283252283252295241200Clostridium perfringens ATCC 13124, complete genomepeptidase, M23/M37 family7e-0856.6
NC_008313:886248:9065829065829078981317Ralstonia eutropha H16 chromosome 1, complete sequenceMembrane protein related to metalloendopeptidases9e-0856.2
NC_008783:222000:2486442486442505841941Bartonella bacilliformis KC583, complete genomeM23 peptidase domain protein1e-0756.2
NC_020300:1344453:1356964135696413589521989Bartonella australis Aust/NH1, complete genomepeptidase, M23/M37 family1e-0755.8
NC_004663:5194400:520812652081265209094969Bacteroides thetaiotaomicron VPI-5482, complete genomeputative peptidase1e-0755.8
NC_006177:3549467:3551933355193335529821050Symbiobacterium thermophilum IAM 14863, complete genomeputative peptidase1e-0755.8
NC_005955:1284500:1298350129835013003562007Bartonella quintana str. Toulouse, complete genomehypothetical protein2e-0755.5
NC_008710:277207:2772072772072784721266Borrelia turicatae 91E135, complete genomecell wall endopeptidase, family M23/M372e-0755.1
NC_003366:255480:2588492588492600481200Clostridium perfringens str. 13, complete genomeprobable cell wall-binding protein3e-0755.1
NC_012026:75812:9358393583949051323Anaplasma marginale str. Florida, complete genomehypothetical protein3e-0755.1
NC_014315:226693:244166244166245113948Nitrosococcus watsoni C-113 chromosome, complete genomepeptidase M233e-0754.7
NC_015684:3340519:3354931335493133570152085Oligotropha carboxidovorans OM5 chromosome, complete genomepeptidase M23B3e-0754.7
NC_011386:763111:7674427674427694842043Oligotropha carboxidovorans OM5, complete genomepeptidase M23B3e-0754.7
NC_020453:7409402:7422330742233074243482019Agromonas oligotrophica S58 DNA, complete genomemetalloendopeptidase4e-0754.3
NC_015953:3159234:316720931672093167898690Streptomyces sp. SirexAA-E chromosome, complete genomepeptidase M234e-0754.3
NC_010161:2050816:2064114206411420661021989Bartonella tribocorum CIP 105476, complete genomemembrane protein related to metalloendopeptidases4e-0754.3
NC_020301:1486695:1499923149992315019141992Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomepeptidase, M23/M37 family5e-0753.9
NC_010321:35855:578175781758761945Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completepeptidase M23B5e-0753.9
NC_014964:35862:578245782458768945Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepeptidase M235e-0753.9
NC_019907:318077:3238173238173255831767Liberibacter crescens BT-1 chromosome, complete genomePeptidase, M23/M37 family5e-0753.9
NC_008435:4842720:4856717485671748587892073Rhodopseudomonas palustris BisA53, complete genomepeptidase M23B7e-0753.5
NC_004463:1520303:1525160152516015273192160Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-0753.5
NC_011146:3537546:356452435645243565267744Geobacter bemidjiensis Bem, complete genomepeptidase M23B8e-0753.1
NC_018643:1037456:1052495105249510537871293Alpha proteobacterium HIMB5 chromosome, complete genomePeptidase family M239e-0753.1
NC_014538:2158131:2170232217023221718571626Thermoanaerobacter sp. X513 chromosome, complete genomePeptidase M239e-0753.1
NC_012846:1888000:1899954189995419019391986Bartonella grahamii as4aup, complete genomepeptidase, M23/M37 family1e-0653.1
NC_009480:703102:7251367251367263951260Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative membrane metalloendopeptidase,subfamily M23B1e-0652.8
NC_000964:2146000:2248350224835022552076858Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0652.8
NC_019897:209523:2111282111282123301203Thermobacillus composti KWC4 chromosome, complete genomemetalloendopeptidase-like membrane protein1e-0652.8
NC_011898:301963:320377320377321168792Clostridium cellulolyticum H10, complete genomePeptidase M231e-0652.8
NC_014152:2849991:2852589285258928537251137Thermincola sp. JR, complete genomePeptidase M231e-0652.4
NC_011295:847903:8620938620938632531161Coprothermobacter proteolyticus DSM 5265, complete genomemembrane protein1e-0652.4
NC_007643:889755:9085849085849101851602Rhodospirillum rubrum ATCC 11170, complete genomePeptidase M23B2e-0652.4
NC_013216:4131563:4148228414822841493581131Desulfotomaculum acetoxidans DSM 771, complete genomePeptidase M232e-0652
NC_014313:3617910:3621792362179236238192028Hyphomicrobium denitrificans ATCC 51888 chromosome, completePeptidase M232e-0652
NC_013947:5747385:5758872575887257599211050Stackebrandtia nassauensis DSM 44728 chromosome, complete genomePeptidase M232e-0652
NC_004668:2198027:2240101224010122428782778Enterococcus faecalis V583, complete genomepeptidase, M23/M37 family3e-0651.6
NC_015259:485015:4891374891374910951959Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase, M23/M37 family protein3e-0651.6
NC_016843:775371:775555775555776532978Treponema pallidum subsp. pertenue str. Gauthier chromosome,M23B subfamily peptidase4e-0651.2
NC_016842:775368:775368775368776345978Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeM23B subfamily peptidase4e-0651.2
NC_013364:2355298:2380989238098923823111323Escherichia coli O111:H- str. 11128, complete genomeputative peptidase4e-0651.2
NC_011741:1978500:2004222200422220055441323Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-0651.2
CU928160:1978500:2004222200422220055441323Escherichia coli IAI1 chromosome, complete genomeputative metallopeptidase4e-0651.2
NC_017268:775000:775034775034776008975Treponema pallidum subsp. pallidum str. Chicago chromosome,M23/M37 peptidase domain-containing protein4e-0651.2
NC_016844:775334:775722775722776699978Treponema pallidum subsp. pallidum DAL-1 chromosome, completeM23B subfamily peptidase4e-0651.2
NC_016848:775822:775822775822776799978Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeM23B subfamily peptidase4e-0651.2
NC_007406:632436:6354086354086374862079Nitrobacter winogradskyi Nb-255, complete genomepeptidase M23B3e-0651.2
NC_012781:3315614:3346278334627833490792802Eubacterium rectale ATCC 33656, complete genomepeptidase, M23 family3e-0651.2
NC_007384:1355060:1358844135884413601031260Shigella sonnei Ss046, complete genomehypothetical protein3e-0651.2
NC_014550:615609:6231916231916242371047Arthrobacter arilaitensis Re117, complete genomeputative M23 family peptidase3e-0651.2
NC_016822:1339058:1341622134162213429441323Shigella sonnei 53G, complete genomeputative peptidase3e-0651.2
NC_013361:2591829:2617519261751926188411323Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-0651.2
NC_014932:1232346:1298524129852413005121989Bartonella clarridgeiae 73, complete genomehypothetical protein5e-0650.8
NC_015714:768500:768664768664769641978Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeM23B subfamily peptidase4e-0650.8
NC_014624:1235818:1256606125660612605473942Eubacterium limosum KIST612 chromosome, complete genomephage-like protein4e-0650.8
NC_010741:775000:775232775232776158927Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein4e-0650.8
NC_000919:773784:773784773784774710927Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein4e-0650.8
NC_021508:775264:775264775264776190927Treponema pallidum subsp. pallidum SS14, complete genomeM23B subfamily peptidase4e-0650.8
NC_012985:846202:8519808519808539381959Candidatus Liberibacter asiaticus str. psy62, complete genomehypothetical protein5e-0650.4
NC_013166:417862:4232114232114247521542Kangiella koreensis DSM 16069, complete genomePeptidase M236e-0650.4
NC_015380:99919:1113581113581126591302Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomepeptidase, M23/M37 family7e-0650.1
NC_014964:2272413:2281555228155522831801626Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepeptidase M239e-0649.7
NC_008340:480399:4849514849514864921542Alkalilimnicola ehrlichei MLHE-1, complete genomepeptidase M23B9e-0649.7