Pre_GI: BLASTP Hits

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Query: NC_011959:815601:826216 Thermomicrobium roseum DSM 5159, complete genome

Start: 826216, End: 827802, Length: 1587

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015216:1278706:1296036129603612975051470Methanobacterium sp. AL-21 chromosome, complete genomepolysaccharide biosynthesis protein5e-2099.8
NC_014408:682689:7084907084907099021413Methanothermobacter marburgensis str. Marburg chromosome, completepolysaccharide biosynthesis protein3e-1997.1
NC_011529:1722829:1730948173094817323721425Thermococcus onnurineus NA1, complete genomehypothetical lipopolysaccharide O-side chain biosynthesis protein3e-1997.1
NC_012883:1817358:1832789183278918342101422Thermococcus sibiricus MM 739, complete genomeLipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)2e-1894.4
NC_015216:808000:8290238290238304591437Methanobacterium sp. AL-21 chromosome, complete genomepolysaccharide biosynthesis protein4e-1686.7
NC_000961:372000:3822633822633835611299Pyrococcus horikoshii OT3, complete genomelipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)3e-1583.6
NC_018876:703633:7119837119837134131431Methanolobus psychrophilus R15 chromosome, complete genomepolysaccharide biosynthesis protein1e-1378.6
NC_007955:742834:7534247534247548601437Methanococcoides burtonii DSM 6242, complete genomepolysaccharide biosynthesis protein1e-1068.9
NC_003901:2479613:2511149251114925126091461Methanosarcina mazei Go1, complete genomeheteropolysaccharide repeat-containing protein1e-0965.5
NC_006624:1494424:1502593150259315038401248Thermococcus kodakarensis KOD1, complete genomecapsular polysaccharide biosynthesis protein1e-0758.5
NC_014002:80967:8842188421897401320Methanohalophilus mahii DSM 5219 chromosome, complete genomepolysaccharide biosynthesis protein1e-0758.5
NC_010475:2537500:2546615254661525479521338Synechococcus sp. PCC 7002, complete genomepolysaccharide biosynthesis export protein1e-0758.5
NC_007514:904565:9374489374489387281281Chlorobium chlorochromatii CaD3, complete genomeprobable polysaccharide biosynthesis protein2e-0757.8
NC_005823:2566588:2579934257993425812771344Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130polysaccharide biosynthesis export protein2e-0654.3
NC_016112:57641:6697366973683101338Methylomicrobium alcaliphilum chromosome, complete genomepolysaccharide biosynthesis protein2e-0654.3
NC_014836:2723060:2740201274020127415531353Desulfurispirillum indicum S5 chromosome, complete genomepolysaccharide biosynthesis protein3e-0653.5