Pre_GI: BLASTP Hits

Some Help

Query: NC_011959:815601:818553 Thermomicrobium roseum DSM 5159, complete genome

Start: 818553, End: 819422, Length: 870

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013741:838243:846379846379847227849Archaeoglobus profundus DSM 5631, complete genomemethylthioadenosine phosphorylase1e-81302
NC_010546:1175979:117999111799911180866876Cyanothece sp. ATCC 51142 chromosome circular, complete sequencemethylthioadenosine phosphorylase6e-75280
NC_009481:1109324:114077311407731141690918Synechococcus sp. WH 7803 chromosome, complete genome5'-methylthioadenosine phosphorylase6e-74277
NC_014836:33278:523925239253249858Desulfurispirillum indicum S5 chromosome, complete genomemethylthioadenosine phosphorylase1e-73276
NC_009523:4585065:458639445863944587290897Roseiflexus sp. RS-1 chromosome, complete genomemethylthioadenosine phosphorylase1e-70266
NC_015954:2405527:240709124070912407963873Halophilic archaeon DL31 chromosome, complete genomemethylthioadenosine phosphorylase3e-67255
NC_013769:123958:123958123958124770813Sulfolobus islandicus L.D.8.5 chromosome, complete genomemethylthioadenosine phosphorylase5e-65248
NC_012726:115500:135730135730136542813Sulfolobus islandicus M.16.4 chromosome, complete genome5'-methylthioadenosine phosphorylase5e-65248
NC_008698:560529:575056575056575844789Thermofilum pendens Hrk 5, complete genomemethylthioadenosine phosphorylase3e-64245
NC_017059:1727095:174055917405591741452894Rhodospirillum photometricum DSM 122, complete genomeMethylthioadenosine phosphorylase5e-56218
NC_014537:603564:626512626512627369858Vulcanisaeta distributa DSM 14429 chromosome, complete genomemethylthioadenosine phosphorylase7e-55214
NC_015151:1427965:144943914494391450296858Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemethylthioadenosine phosphorylase1e-53210
NC_016645:1059482:107816210781621079001840Pyrobaculum sp. 1860 chromosome, complete genome5'-methylthioadenosine phosphorylase4e-53208
NC_013510:991827:100885910088591009698840Thermomonospora curvata DSM 43183, complete genomemethylthioadenosine phosphorylase1e-52206
NC_018750:3315309:331882733188273319705879Streptomyces venezuelae ATCC 10712, complete genome5-methylthioadenosine phosphorylase3e-52205
NC_013595:9547254:954940295494029550211810Streptosporangium roseum DSM 43021, complete genomemethylthioadenosine phosphorylase2e-51202
NC_009953:1034809:103806710380671038870804Salinispora arenicola CNS-205 chromosome, complete genome5'-methylthioadenosine phosphorylase5e-51201
NC_013939:441921:455988455988456782795Deferribacter desulfuricans SSM1, complete genomeS-methyl-5-thioadenosine phosphorylase2e-49196
NC_011297:787932:787144787144787935792Dictyoglomus thermophilum H-6-12, complete genomemethylthioadenosine phosphorylase7e-48191
NC_011297:767333:787144787144787935792Dictyoglomus thermophilum H-6-12, complete genomemethylthioadenosine phosphorylase7e-48191
NC_014804:189368:210524210524211327804Thermococcus barophilus MP chromosome, complete genome5'-methylthioadenosine phosphorylase4e-47188
NC_015873:1901939:190425419042541905048795Megasphaera elsdenii DSM 20460, complete genomemethylthioadenosine phosphorylase1e-44180
NC_012438:1514376:153362515336251534464840Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemethylthioadenosine phosphorylase8e-44177
NC_015672:1921023:192816319281631928957795Flexistipes sinusarabici DSM 4947 chromosome, complete genomeS-methyl-5'-thioadenosine phosphorylase4e-43175
NC_015577:1170186:118709011870901187836747Treponema azotonutricium ZAS-9 chromosome, complete genomemethylthioadenosine phosphorylase8e-41167
NC_013790:583474:607898607898608671774Methanobrevibacter ruminantium M1 chromosome, complete genomemethylthioadenosine phosphorylase MtnP3e-40165
NC_015578:247266:252588252588253334747Treponema primitia ZAS-2 chromosome, complete genomemethylthioadenosine phosphorylase1e-39163
NC_014964:923681:926187926187926957771Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepurine or other phosphorylase family 15e-39161
NC_015958:1516944:152916415291641529934771Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomepurine or other phosphorylase family 11e-38160
NC_016584:4860360:488578748857874886569783Desulfosporosinus orientis DSM 765 chromosome, complete genome5'-deoxy-5'-methylthioadenosine phosphorylase5e-38158
NC_011761:292903:312311312311313123813Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completemethylthioadenosine phosphorylase1e-36153
NC_007947:1556437:157534115753411576087747Methylobacillus flagellatus KT, complete genome5'-methylthioadenosine phosphorylase3e-35149
NC_012559:2752825:277198427719842772748765Laribacter hongkongensis HLHK9, complete genome5'-methylthioadenosine phosphorylase3e-32139
NC_015587:114684:123792123792124631840Hydrogenobaculum sp. SHO chromosome, complete genomeS-methyl-5'-thioadenosine phosphorylase4e-32138
NC_020411:114683:123791123791124630840Hydrogenobaculum sp. HO, complete genomepurine or other phosphorylase family 14e-32138
NC_015557:114648:123756123756124595840Hydrogenobaculum sp. 3684 chromosome, complete genomeS-methyl-5'-thioadenosine phosphorylase4e-32138
NC_015388:1612000:162260416226041623479876Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeS-methyl-5'-thioadenosine phosphorylase5e-27121
NC_003888:3817000:382285038228503823638789Streptomyces coelicolor A3(2), complete genomephosphorylase2e-21103
NC_017068:2827568:285411128541112854962852Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phosphorylase superfamily protein1e-1584
NC_015277:380624:380624380624381442819Sphingobacterium sp. 21 chromosome, complete genomepurine nucleoside phosphorylase I, inosine and guanosine-specific4e-1168.9
NC_009051:1074993:107801710780171078688672Methanoculleus marisnigri JR1, complete genomepurine phosphorylase, family 24e-1065.5
NC_020418:1364943:136632113663211367139819Morganella morganii subsp. morganii KT, complete genomePurine nucleoside phosphorylase4e-0858.9
NC_017075:4880807:488328448832844884093810Rubrivivax gelatinosus IL144, complete genomepurine nucleoside phosphorylase PunA2e-0757
NC_015064:1238899:123963312396331240481849Acidobacterium sp. MP5ACTX9 chromosome, complete genomeinosine guanosine and xanthosine phosphorylase family2e-0757
NC_011565:620801:624277624277625089813Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,purine nucleoside phosphorylase2e-0756.6
NC_010003:605961:624803624803625615813Petrotoga mobilis SJ95, complete genomepurine nucleoside phosphorylase I, inosine and guanosine-specific4e-0755.5