Pre_GI: BLASTP Hits

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Query: NC_011770:1431740:1434938 Pseudomonas aeruginosa LESB58, complete genome

Start: 1434938, End: 1435180, Length: 243

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012791:2590500:259166225916622591865204Variovorax paradoxus S110 chromosome 1, complete genomeExcisionase domain protein7e-1165.9
NC_015566:4350080:436444143644414364722282Serratia sp. AS12 chromosome, complete genomeExcisionase domain-containing protein2e-0961.2
NC_003198:1908238:193223519322351932516282Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative excisionase5e-0959.7
NC_013850:1887556:189447918944791894751273Klebsiella variicola At-22 chromosome, complete genomeExcisionase domain protein7e-0959.3
NC_011294:1220526:122752512275251227803279Salmonella enterica subsp. enterica serovar Enteritidis strexcisionase4e-0857
NC_000913:1188999:120001012000101200255246Escherichia coli K12, complete genomee14 prophage; predicted excisionase3e-0857
AC_000091:1191353:120236412023641202609246Escherichia coli W3110 DNA, complete genomepredicted excisionase3e-0857
NC_016612:3803130:381021138102113810456246Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative excisionase4e-0650.4
NC_012779:1966205:197362519736251973873249Edwardsiella ictaluri 93-146, complete genomeexcisionase4e-0650.1
NC_020418:2910593:291745929174592917701243Morganella morganii subsp. morganii KT, complete genomehypothetical protein9e-0648.9