Pre_GI: BLASTP Hits

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Query: NC_011770:1226923:1230773 Pseudomonas aeruginosa LESB58, complete genome

Start: 1230773, End: 1231663, Length: 891

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1100047:110534811053481106238891Pseudomonas aeruginosa DK2 chromosome, complete genomeABC transporter permease2e-142505
NC_002516:4285477:429831142983114299201891Pseudomonas aeruginosa PAO1, complete genomeprobable permease of ABC transporter2e-142505
NC_008463:1223012:122686212268621227752891Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transmembrane component of ABC transporte2e-142505
NC_015138:2364500:236618523661852367069885Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeinner-membrane translocator6e-114410
NC_012856:1585989:158714515871451588053909Ralstonia pickettii 12D chromosome 1, complete genomeinner-membrane translocator7e-110396
NC_017506:1507943:152598815259881526890903Marinobacter adhaerens HP15 chromosome, complete genomeinner-membrane translocator7e-75280
NC_020409:512861:544790544790545683894Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeInner-membrane translocator2e-59229
NC_014246:373247:397527397527398516990Mobiluncus curtisii ATCC 43063 chromosome, complete genomeABC transporter membrane protein1e-53209
NC_008783:29972:520895208952982894Bartonella bacilliformis KC583, complete genomeABC transporter, permease protein8e-53207
NC_006510:2044347:207488320748832075875993Geobacillus kaustophilus HTA426, complete genomeABC transporter (permease)3e-52205
NC_018664:287769:304430304430305344915Clostridium acidurici 9a chromosome, complete genomeABC transporter, permease protein2e-51202
NC_015385:2135456:215103521510352151997963Treponema succinifaciens DSM 2489 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-48193
NC_015391:1248583:126785412678541268744891Carnobacterium sp. 17-4 chromosome, complete genomeputative ABC transporter, membrane-spanning subunit4e-48191
NC_010681:74587:945799457995499921Burkholderia phytofirmans PsJN chromosome 1, complete sequenceinner-membrane translocator3e-45182
NC_020207:2575808:258974825897482590653906Enterococcus faecium NRRL B-2354, complete genomeABC transporter permease protein3e-45182
NC_011830:3025437:303918630391863040115930Desulfitobacterium hafniense DCB-2, complete genomeinner-membrane translocator1e-44179
NC_007907:1940000:195365319536531954582930Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-44179
NC_009617:1278000:129262612926261293528903Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator5e-44178
NC_020291:1266885:130112413011241302038915Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type uncharacterized transport system, permease component2e-43176
NC_008021:803777:825347825347826228882Streptococcus pyogenes MGAS9429, complete genomeABC transporter permease protein2e-40166
NC_008314:2744553:276770927677092768626918Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, permease component6e-40164
NC_012470:2021316:204344220434422044326885Streptococcus equi subsp. zooepidemicus, complete genometransport system permease protein1e-38160
NC_015732:3145634:315882131588213159747927Spirochaeta caldaria DSM 7334 chromosome, complete genomeABC transporter integral membrane subunit1e-37157
NC_015601:436822:444477444477445331855Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeABC transporter permease4e-36152
NC_013192:958000:9689769689769701211146Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator1e-34147
NC_012004:1053682:108335210833521084221870Streptococcus uberis 0140J, complete genomeABC transporter permease protein1e-32140
NC_010571:5650806:566611056661105667009900Opitutus terrae PB90-1, complete genomeinner-membrane translocator3e-28125
NC_015732:2057895:2060490206049020615331044Spirochaeta caldaria DSM 7334 chromosome, complete genomeABC transporter integral membrane subunit2e-0653.1