Pre_GI: BLASTP Hits

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Query: NC_011769:2016000:2022877 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2022877, End: 2025693, Length: 2817

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:1548081:1567152156715215699502799Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail tape measure protein, putative8e-179628
NC_014217:4597426:4600648460064846025131866Starkeya novella DSM 506 chromosome, complete genomephage tape measure protein9e-34146
NC_014217:16398:1639816398184042007Starkeya novella DSM 506 chromosome, complete genomephage tape measure protein2e-32142
NC_013730:6471484:6490013649001364925262514Spirosoma linguale DSM 74, complete genomephage tape measure protein2e-26121
NC_013730:3956457:3970749397074939732652517Spirosoma linguale DSM 74, complete genomephage tape measure protein3e-26121
NC_006371:1411335:1424965142496514273702406Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein6e-25117
NC_020054:4848000:4916982491698249197502769Fibrella aestuarina BUZ 2 drat genomephage tape measure protein1e-23112
NC_007384:1086025:1094701109470110968812181Shigella sonnei Ss046, complete genomehypothetical protein3e-1894.7
NC_011353:1513000:1513050151305015162923243Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail length tape measure protein2e-1792
NC_013008:1513000:1513338151333815165803243Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail length tape measure protein2e-1792
NC_013361:3597812:3622769362276936260113243Escherichia coli O26:H11 str. 11368 chromosome, complete genometail length tape measure protein2e-1792
NC_007384:2007467:2015762201576220170391278Shigella sonnei Ss046, complete genomehypothetical protein4e-1790.9
NC_013892:3803278:3809899380989938132073309Xenorhabdus bovienii SS-2004 chromosome, complete genometapemeasure protein9e-1789.7
NC_013361:1593543:1597749159774916009913243Escherichia coli O26:H11 str. 11368 chromosome, complete genometail length tape measure protein2e-1689
NC_013364:1997891:2020520202052020219621443Escherichia coli O111:H- str. 11128, complete genome3e-1688.2
NC_011750:919953:9230809230809259292850Escherichia coli IAI39 chromosome, complete genometail length tape measure protein6e-1687
NC_020418:2868000:2893771289377128970283258Morganella morganii subsp. morganii KT, complete genomePhage tail length tape-measure protein 19e-1686.7
NC_008563:2041345:2060436206043620636813246Escherichia coli APEC O1, complete genomephage-related minor tail protein2e-1585.1
NC_013892:2005480:2019872201987220232463375Xenorhabdus bovienii SS-2004 chromosome, complete genometail component2e-1482
NC_013892:671000:6751336751336785073375Xenorhabdus bovienii SS-2004 chromosome, complete genometail component2e-1482
NC_015566:3622385:3638362363836236414873126Serratia sp. AS12 chromosome, complete genomephage tail tape measure protein, lambda family4e-1480.9
NC_020054:4933725:4939523493952349424262904Fibrella aestuarina BUZ 2 drat genomehypothetical protein7e-1480.1
NC_008563:5011997:5033914503391450369883075Escherichia coli APEC O1, complete genomeputative tail component of prophage CP-933K1e-1379.3
NC_013008:918215:9182159182159212803066Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K1e-1379.3
NC_011742:4962008:4983903498390349869983096Escherichia coli S88 chromosome, complete genometail length tape measure protein from prophage1e-1379.3
NC_011740:4520373:4541372454137245444673096Escherichia fergusonii ATCC 35469, complete genomeputative tail length tape measure protein from putative prophage1e-1379
NC_016816:2925459:2947544294754429508883345Pantoea ananatis LMG 5342, complete genomephage tail tape measure protein, TP901 family6e-1377
NC_009801:1392696:1407125140712514092572133Escherichia coli E24377A, complete genomehypothetical protein1e-1173.2
NC_009436:2395913:2416369241636924196563288Enterobacter sp. 638, complete genomelambda family phage tail tape measure protein4e-1170.9
NC_012491:3088500:3092380309238030942301851Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-1067.8
NC_012559:1663214:1679778167977816825582781Laribacter hongkongensis HLHK9, complete genomePhage tail tape measure protein, lambda family7e-0963.5
NC_020211:2882093:2893957289395728961402184Serratia marcescens WW4, complete genomehypothetical protein9e-0963.2
NC_021182:3347076:3352858335285833554942637Clostridium pasteurianum BC1, complete genometape measure domain protein2e-0862
NC_020911:2793234:280622128062212806913693Octadecabacter antarcticus 307, complete genomeputative gene transfer agent protein4e-0860.8
NC_014034:1816000:182621918262191826878660Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein5e-0860.8
NC_003911:2379254:239939523993952400057663Silicibacter pomeroyi DSS-3, complete genome3e-0758.2
NC_008687:45967:564855648557156672Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage-related minor tail protein-like1e-0655.8
NC_008463:1912348:1929042192904219313662325Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-0654.3