Pre_GI: BLASTP Hits

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Query: NC_011601:1269500:1273781 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 1273781, End: 1274188, Length: 408

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:1859606:188001818800181880476459Escherichia coli UMN026 chromosome, complete genometranscriptional repressor DicA2e-71267
NC_013361:2138716:215983821598382160245408Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional repressor DicA3e-71266
NC_011748:1408280:141408614140861414544459Escherichia coli 55989, complete genometranscriptional repressor DicA5e-71265
CU928145:1408280:141408614140861414544459Escherichia coli 55989 chromosome, complete genomeputative repressor protein of division inhibition from phage origin5e-71265
NC_020260:1615135:162344316234431623850408Cronobacter sakazakii Sp291, complete genometranscriptional repressor DicA3e-50196
NC_016612:3314846:332407433240743324481408Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscriptional repressor DicA6e-44176
CP002185:1770815:179273017927301793137408Escherichia coli W, complete genomeQin prophage; predicted regulator for DicB3e-35146
CP002516:2305659:231271923127192313126408Escherichia coli KO11, complete genomehelix-turn-helix domain protein3e-35146
AC_000091:1627049:164964816496481650055408Escherichia coli W3110 DNA, complete genomepredicted regulator for DicB3e-35146
NC_010468:2265423:226963722696372270044408Escherichia coli ATCC 8739, complete genometranscriptional regulator, XRE family3e-35146
NC_000913:1625500:164595816459581646365408Escherichia coli K12, complete genomeQin prophage; predicted regulator for DicB3e-35146
CU928160:1668842:169078616907861691193408Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator for DicB; Qin prophage3e-35146
NC_010473:1712984:173558317355831735990408Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted regulator for DicB3e-35146
NC_011741:1668842:169078616907861691193408Escherichia coli IAI1 chromosome, complete genometranscriptional repressor DicA3e-35146
NC_012759:1517500:153801715380171538424408Escherichia coli BW2952 chromosome, complete genometranscriptional repressor DicA3e-35146
NC_016902:2305659:231271923127192313126408Escherichia coli KO11FL chromosome, complete genomehelix-turn-helix domain-containing protein3e-35146
CU928145:1773642:179391017939101794317408Escherichia coli 55989 chromosome, complete genomeHTH-type transcriptional regulator dicA (Repressor protein of division inhibition gene dicA) of prophage4e-34143
NC_011748:1773642:179391017939101794317408Escherichia coli 55989, complete genometranscriptional repressor DicA4e-34143
NC_009801:2193000:221593622159362216331396Escherichia coli E24377A, complete genomeputative transcriptional regulator DicA4e-27119
NC_012214:1974500:198214819821481982549402Erwinia pyrifoliae Ep1/96, complete genomeHTH-type transcriptional regulator DicA1e-26118
NC_011415:2277559:230242823024282302757330Escherichia coli SE11 chromosome, complete genometranscriptional repressor DicA4e-21100
NC_007954:3887488:389894838989483899637690Shewanella denitrificans OS217, complete genometransciptional regulator7e-1682.8
NC_014562:1844268:185137318513731852005633Pantoea vagans C9-1 chromosome, complete genomeLexA repressor2e-1270.9
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c23e-1270.5
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c26e-1269.3
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI6e-1269.3
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator6e-1269.3
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c26e-1269.3
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage2e-1167.8
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein3e-1167.4
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C23e-1167
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)7e-1165.9
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein9e-1165.9
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator1e-1065.5
NC_008800:2013450:201947120194712019890420Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative DNA-binding protein1e-1065.1
NC_015224:2095816:210463321046332105052420Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding protein2e-1064.3
NC_009999:38832:459184591846562645Shewanella baltica OS195 plasmid pS19502, complete sequenceputative phage repressor2e-0961.2
NC_016584:5388500:541244654124465412778333Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-0960.8
NC_015172:1195782:120453112045311204860330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehelix-turn-helix domain protein3e-0960.5
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage7e-0959.3
NC_021066:2226826:224391422439142244135222Raoultella ornithinolytica B6, complete genomeregulatory protein cro (Antirepressor)2e-0857.4
NC_015977:3011177:302804130280413028793753Roseburia hominis A2-183 chromosome, complete genomehypothetical protein9e-0855.5
NC_003198:1908238:192490319249031925322420Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulator2e-0754.7
NC_016791:2888319:289017028901702890790621Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains2e-0754.7
NC_011898:2509267:251475425147542515374621Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family2e-0754.7
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage2e-0754.7
NC_011206:1233985:123617212361721236630459Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, XRE family4e-0753.5
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein4e-0753.5
NC_011206:123791:124221124221124679459Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, XRE family5e-0753.1
NC_007644:280000:287262287262287648387Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family5e-0753.1
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor6e-0753.1
NC_012917:2971702:299238929923892992802414Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family8e-0752.4
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor1e-0652
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)2e-0651.2
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0650.8
NC_013892:1272448:128399912839991284364366Xenorhabdus bovienii SS-2004 chromosome, complete genomeDNA-binding protein3e-0650.8
NC_012125:1330066:134546413454641345679216Salmonella enterica subsp. enterica serovar Paratyphi C strainregulatory protein cro (Antirepressor)5e-0650.1
NC_011094:593100:610406610406610621216Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-0650.1
NC_006905:368942:383603383603383818216Salmonella enterica subsp. enterica serovar Choleraesuis strregulatory protein cro (Antirepressor)5e-0650.1
NC_016612:3803130:381419638141963814579384Klebsiella oxytoca KCTC 1686 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0649.3