Pre_GI: BLASTP Hits

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Query: NC_011593:1651635:1660928 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1660928, End: 1662319, Length: 1392

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:1651425:1660718166071816621091392Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage integrase0962
NC_015052:1030708:1066828106682810682191392Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase0941
NC_006087:345976:3584293584293597331305Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase8e-36151
NC_006087:28490:4660446604479081305Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase8e-36151
NC_013174:2321000:2324963232496323261501188Jonesia denitrificans DSM 20603, complete genomeintegrase family protein1e-1998.2
NC_012590:2117027:2155452215545221566361185Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein6e-1685.9
NC_010397:1751067:1754551175455117558011251Mycobacterium abscessus chromosome Chromosome, complete sequencePutative phage integrase1e-1274.7
NC_009921:6691089:6703155670315567044351281Frankia sp. EAN1pec, complete genomeintegrase family protein5e-1169.7
NC_014616:862084:8713018713018724341134Bifidobacterium bifidum S17 chromosome, complete genomeIntegrase/recombinase8e-1065.5
NC_015635:4097711:4113207411320741144211215Microlunatus phosphovorus NM-1, complete genomeputative recombinase2e-0963.9
NC_020410:1123121:112994211299421130733792Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeDNA integration/recombination/invertion protein2e-0757.8
NC_013510:5115500:5140302514030251415311230Thermomonospora curvata DSM 43183, complete genomeintegrase family protein8e-0755.5
NC_020387:796253:8023368023368034931158Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, phage integrase family1e-0655.1