Pre_GI: BLASTP Hits

Some Help

Query: NC_011593:1622260:1624929 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1624929, End: 1626851, Length: 1923

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:1622050:1624719162471916266411923Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein01338
NC_010816:621849:6253856253856273071923Bifidobacterium longum DJO10A, complete genomehypothetical protein01326
NC_017219:1622050:1628139162813916302862148Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein7e-26119
NC_011593:1622260:1627791162779116304962706Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,zinc finger, SWIM domain-containing protein2e-25118
NC_010816:621849:6298816298816319862106Bifidobacterium longum DJO10A, complete genomehypothetical protein2e-25117
NC_015052:1094825:1106555110655511087022148Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein3e-25117
NC_017221:1222963:1229179122917912313262148Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein2e-24114
NC_015690:7785875:7791059779105977927561698Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-0861.6
NC_007426:1840670:1848148184814818501602013Natronomonas pharaonis DSM 2160, complete genomehypothetical protein4e-0860.5
NC_020291:4357425:4366294436629443679971704Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein5e-0860.1
NC_013967:1590500:161363516136351614432798Haloferax volcanii DS2 chromosome, complete genomeSWIM zinc finger domain protein2e-0758.2
NC_016935:7872425:787458678745867875284699Paenibacillus mucilaginosus 3016 chromosome, complete genome2e-0758.2
NC_017219:1622050:163341216334121633900489Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein4e-0757
NC_011593:1622260:163362216336221634110489Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,zinc finger, SWIM domain-containing protein4e-0757
NC_013922:138246:1382461382461407922547Natrialba magadii ATCC 43099 chromosome, complete genomezinc finger SWIM domain protein5e-0756.6
NC_013967:1590500:1605225160522516072071983Haloferax volcanii DS2 chromosome, complete genomehypothetical protein (TBD)5e-0756.6
NC_013922:138246:175086175086175886801Natrialba magadii ATCC 43099 chromosome, complete genomezinc finger SWIM domain protein5e-0653.5
NC_019974:2421422:243080324308032431603801Natronococcus occultus SP4, complete genomehypothetical protein8e-0652.8