Pre_GI: BLASTP Hits

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Query: NC_011593:1202726:1202726 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1202726, End: 1203697, Length: 972

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010617:1467000:1467614146761414686271014Kocuria rhizophila DC2201, complete genomeDNA polymerase III delta subunit7e-28124
NC_015656:1876627:189635318963531897348996Frankia symbiont of Datisca glomerata chromosome, complete genomeDNA polymerase III subunit delta5e-23108
NC_006361:1547034:156729915672991568264966Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-22107