Pre_GI: BLASTP Hits

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Query: NC_011528:1492000:1505752 Coxiella burnetii CbuK_Q154, complete genome

Start: 1505752, End: 1506834, Length: 1083

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii K Q154 was isolated from a patient with endocarditis and contains the plasmid QpRS. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009727:670616:6896496896496907611113Coxiella burnetii Dugway 7E9-12, complete genomeglycosyl transferase, group 2 family protein0724
NC_002971:619355:6408976408976420091113Coxiella burnetii RSA 493, complete genomeglycosyl transferase, group 2 family protein0724
NC_011527:1255998:1268962126896212700741113Coxiella burnetii CbuG_Q212, complete genomeglycosyltransferase0724
NC_010117:700112:7216397216397227511113Coxiella burnetii RSA 331, complete genomeglycosyl transferase, group 2 family protein0723
NC_014150:137315:1501691501691516111443Brachyspira murdochii DSM 12563 chromosome, complete genomeglycosyl transferase family 21e-1171.2
NC_014150:137315:1516041516041526411038Brachyspira murdochii DSM 12563 chromosome, complete genomeglycosyl transferase family 21e-0964.3
NC_017243:1652000:1660064166006416610921029Brachyspira intermedia PWS/A chromosome, complete genomefamily 2 glycosyl transferase2e-0963.5
NC_017243:1652000:1661098166109816624711374Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein3e-0963.2
NC_003413:748906:761479761479762375897Pyrococcus furiosus DSM 3638, complete genomeglycosyl transferase2e-0860.5
NC_016051:1429800:144903414490341449945912Thermococcus sp. AM4 chromosome, complete genomeglycosyl transferase family protein2e-0860.5
NC_003901:775500:782580782580783503924Methanosarcina mazei Go1, complete genomeglycosyltransferase3e-0860.1
NC_012804:2017531:203467920346792035593915Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 23e-0859.7
NC_008553:1038344:104664510466451047553909Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 27e-0858.5
NC_009483:3544333:355772135577213558677957Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein2e-0757.4
NC_007492:4563981:4567333456733345684091077Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 24e-0755.8
NC_015732:1636368:164907716490771650057981Spirochaeta caldaria DSM 7334 chromosome, complete genomeglycosyl transferase family 26e-0755.5
NC_011566:1639444:1656867165686716579461080Shewanella piezotolerans WP3, complete genomeGlycosyl transferase, family 21e-0654.3
NC_014758:1207894:121467712146771215615939Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 22e-0653.9