Pre_GI: BLASTP Hits

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Query: NC_011369:4395773:4394541 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 4394541, End: 4395776, Length: 1236

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013161:2804228:2812486281248628137271242Cyanothece sp. PCC 8802, complete genomeC-methyltransferase5e-131468
NC_010511:5467009:5473984547398454752791296Methylobacterium sp. 4-46 chromosome, complete genomeC-methyltransferase5e-131467
NC_012559:2563922:2583939258393925851711233Laribacter hongkongensis HLHK9, complete genomeNDP-hexose 3-C-methyltransferase protein2e-125449
NC_007759:2638992:2652831265283126540571227Syntrophus aciditrophicus SB, complete genomemethyltransferase1e-119429
NC_009484:661089:6674166674166686391224Acidiphilium cryptum JF-5 chromosome, complete genomeC-methyltransferase1e-117423
NC_015186:755000:7595657595657607881224Acidiphilium multivorum AIU301, complete genomemethyltransferase2e-117422
NC_014758:1207894:1221324122132412225501227Calditerrivibrio nitroreducens DSM 19672 chromosome, completec-methyltransferase2e-116419
NC_013959:2892660:2912953291295329141791227Sideroxydans lithotrophicus ES-1 chromosome, complete genomeC-methyltransferase2e-114412
NC_007964:3036771:3053065305306530542911227Nitrobacter hamburgensis X14, complete genomeMethyltransferase type 122e-114412
NC_015717:1723047:1726134172613417273721239Hyphomicrobium sp. MC1, complete genomeputative methyltransferase1e-113409
NC_016616:49388:6666266662678881227Dechlorosoma suillum PS chromosome, complete genomemethyltransferase family protein6e-112404
NC_013757:368973:3931943931943944441251Geodermatophilus obscurus DSM 43160, complete genomeC-methyltransferase5e-110398
NC_016947:3309898:3337808333780833390101203Mycobacterium intracellulare MOTT-02 chromosome, complete genomemethyltransferase1e-106387
NC_011725:3231859:3251638325163832528611224Bacillus cereus B4264 chromosome, complete genomemethyltransferase1e-106387
NC_000911:352263:3559093559093572101302Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-107387
NC_017039:352263:3559093559093572101302Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein8e-107387
NC_017052:352251:3558973558973571981302Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein8e-107387
NC_017277:352263:3559093559093572101302Synechocystis sp. PCC 6803, complete genomehypothetical protein8e-107387
NC_014844:3538432:3543108354310835443371230Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeC-methyltransferase1e-106386
NC_017200:3221508:3240673324067332418961224Bacillus thuringiensis serovar finitimus YBT-020 chromosome,methyltransferase3e-106385
NC_011658:3144000:3162233316223331634561224Bacillus cereus AH187 chromosome, complete genomemethyltransferase3e-106385
NC_016771:3097173:3116392311639231176151224Bacillus cereus NC7401, complete genomemethyltransferase3e-106385
NC_011969:3106500:3124394312439431256171224Bacillus cereus Q1 chromosome, complete genomemethyltransferase5e-106384
NC_004722:3303264:3323011332301133242341224Bacillus cereus ATCC 14579, complete genomeMethyltransferase7e-106384
NC_016948:3381848:3409823340982334110251203Mycobacterium intracellulare MOTT-64 chromosome, complete genomemethyltransferase8e-106384
NC_008228:3679949:3694090369409036953101221Pseudoalteromonas atlantica T6c, complete genomeC-methyltransferase3e-105382
NC_008570:4594436:4612089461208946133121224Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-104379
NC_007604:41495:5907259072603041233Synechococcus elongatus PCC 7942, complete genomeputative C-3 methyl transferase2e-102372
NC_006576:1551939:1560579156057915618111233Synechococcus elongatus PCC 6301, complete genomeputative C-3 methyl transferase2e-102372
NC_008596:6009511:6043705604370560449611257Mycobacterium smegmatis str. MC2 155, complete genomemethyltransferase2e-90333
NC_008268:6149576:6175583617558361768421260Rhodococcus sp. RHA1, complete genomeprobable methyltransferase2e-89330
NC_003078:671000:6945446945446957911248Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative NDP-hexose 3-C-methyltransferase protein7e-88324
NC_017323:599549:6198416198416210881248Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceC-methyltransferase2e-87322
NC_009921:7964128:7981604798160479828361233Frankia sp. EAN1pec, complete genomeC-methyltransferase4e-87322
NC_011884:2051723:2063409206340920646381230Cyanothece sp. PCC 7425, complete genomeC-methyltransferase3e-80299
NC_010505:1264758:1285820128582012870791260Methylobacterium radiotolerans JCM 2831, complete genomeC-methyltransferase6e-72271
NC_011369:4395773:4401925440192544031481224Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeC-methyltransferase3e-64245
NC_014166:2498500:2564203256420325654261224Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeC-methyltransferase5e-62238
NC_014844:2158318:2168601216860121698421242Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeC-methyltransferase2e-51203
NC_009712:1822375:1838571183857118398001230Candidatus Methanoregula boonei 6A8, complete genomeC-methyltransferase1e-35150
NC_007948:4176579:4185652418565241868931242Polaromonas sp. JS666, complete genomeNDP-hexose 3-C-methyltransferase TylCIII9e-34144
NC_007796:2387002:2395543239554323967721230Methanospirillum hungatei JF-1, complete genomeNDP-hexose 3-C-methyltransferase TylCIII4e-32139
NC_014733:107394:1186871186871199401254Methylovorus sp. MP688 chromosome, complete genomec-methyltransferase3e-31136
NC_009937:53082:6436764367656051239Azorhizobium caulinodans ORS 571, complete genomeS-adenosyl-dependent methyl transferase7e-29128
NC_018876:2277160:2288898228889822901271230Methanolobus psychrophilus R15 chromosome, complete genomeC-methyltransferase3e-28126
NC_016588:133943:158967158967159446480Azospirillum lipoferum 4B plasmid AZO_p6, complete sequencehypothetical protein9e-28124
NC_002971:619355:6374646374646386421179Coxiella burnetii RSA 493, complete genomeNDP-hexose 3-C-methyltransferase TylCIII1e-27124
NC_011527:1255998:1272329127232912735671239Coxiella burnetii CbuG_Q212, complete genomemethyltransferase1e-27124
NC_009727:670616:6861566861566873941239Coxiella burnetii Dugway 7E9-12, complete genomeNDP-hexose 3-C-methyltransferase TylCIII1e-27124
NC_014311:2606434:2633372263337226346101239Ralstonia solanacearum PSI07 chromosome, complete genomeS-adenosyl-dependent methyltransferase1e-27124
NC_011528:1492000:1509089150908915103271239Coxiella burnetii CbuK_Q154, complete genomemethyltransferase2e-27124
NC_010117:700112:7181467181467193841239Coxiella burnetii RSA 331, complete genomeNDP-hexose 3-C-methyltransferase TylCIII2e-27123
NC_014844:2158318:2167344216734421685581215Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeC-methyltransferase7e-27121
NC_009921:7964128:7982833798283379840231191Frankia sp. EAN1pec, complete genomeC-methyltransferase2e-1997.1
NC_013757:368973:3955213955213966511131Geodermatophilus obscurus DSM 43160, complete genomeC-methyltransferase9e-1685.1
NC_003078:671000:7011317011317023361206Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative NDP-hexose methyltransferase protein2e-1377.4
NC_017323:599549:6132026132026145001299Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceC-methyltransferase2e-1377.4
NC_008268:6149576:6171225617122561724631239Rhodococcus sp. RHA1, complete genomepossible transferase5e-1375.9
NC_002927:118982:1302551302551314181164Bordetella bronchiseptica RB50, complete genomeputative C-methyltransferase3e-0963.5
NC_015636:41968:458954589546884990Methanothermococcus okinawensis IH1 chromosome, complete genometype 11 methyltransferase4e-0962.8
NC_016616:49388:6474864748658271080Dechlorosoma suillum PS chromosome, complete genomemethyltransferase family protein1e-0861.2
NC_014158:73344:7334473344757972454Tsukamurella paurometabola DSM 20162 chromosome, complete genomeaminotransferase class-III3e-0860.1
NC_020541:1014176:1024159102415910252411083Rhodanobacter sp. 2APBS1, complete genomemethyltransferase family protein6e-0858.9
NC_007517:480303:499769499769500686918Geobacter metallireducens GS-15, complete genomehypothetical protein2e-0757.4
NC_008596:6009511:6039559603955960406321074Mycobacterium smegmatis str. MC2 155, complete genomemethyltransferase type 12, putative2e-0757
NC_014844:3538432:3547485354748535485791095Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype 11 methyltransferase2e-0757
NC_015572:427732:427732427732428712981Methylomonas methanica MC09 chromosome, complete genometype 11 methyltransferase3e-0757
NC_014150:137315:1537101537101549571248Brachyspira murdochii DSM 12563 chromosome, complete genomeMethyltransferase type 128e-0755.1
NC_014387:1362440:1373143137314313742851143Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeSAM-dependent methyltransferase1e-0654.3
NC_009659:2523874:2545686254568625468551170Janthinobacterium sp. Marseille chromosome, complete genomeC-methyltransferase6e-0652.4