Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1167739 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1167739, End: 1169988, Length: 2250

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017267:29461:4981049810508831074Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeendoglucanase6e-36152
NC_017267:29461:5168851688526891002Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeendoglucanase3e-35150
NC_007761:241900:2431832431832442321050Rhizobium etli CFN 42, complete genomeendoglucanase precursor (cellulase) protein4e-26120
NC_010511:1641416:1682342168234216840121671Methylobacterium sp. 4-46 chromosome, complete genomeglycoside hydrolase6e-26119
NC_012968:1945614:1955108195510819561451038Methylotenera mobilis JLW8, complete genomeglycoside hydrolase family 53e-1481.3
NC_010524:2530841:2546580254658025476381059Leptothrix cholodnii SP-6, complete genomeglycoside hydrolase family 53e-1170.9