Pre_GI: BLASTP Hits

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Query: NC_011368:678291:689185 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,

Start: 689185, End: 689397, Length: 213

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1898648:192088719208871921111225Bradyrhizobium japonicum USDA 110, complete genomenitrogen fixation protein4e-1063.5
NC_010627:532407:548416548416548634219Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencenitrogen fixation protein FixT1e-0755.1
NC_011894:4066926:408404940840494084267219Methylobacterium nodulans ORS 2060, complete genomenitrogen fixation protein FixT3e-0650.4
NC_010529:296500:331913331913332122210Cupriavidus taiwanensis plasmid pRALTA, complete sequenceFixU nitrogen fixation protein9e-0648.9